GEO Browser - GEO

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74 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			BROADPEAK
GSE151011	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BROADPEAK SRA Run Selector	Jakub Abramson	Sep 01, 2021
GSE151013	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	BED BROADPEAK NARROWPEAK	Jakub Abramson	Aug 30, 2021
GSE192873	Transcriptional regulation of the thymus master regulator Foxn1 [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BROADPEAK	Jakub Abramson	Aug 03, 2022
GSE192875	Transcriptional regulation of the thymus master regulator Foxn1	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	72	BROADPEAK BW NARROWPEAK	Jakub Abramson	Aug 03, 2022
GSE101546	SETDB1 controls T helper cell lineage integrity by repressing endogenous retroviruses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BROADPEAK TXT SRA Run Selector	Veronique Adoue	Feb 05, 2019
GSE223014	Chip seq of in vitro induced senescent myeloid cells treated with HDAC inhibitor	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BROADPEAK BW	Andrea Alimonti	Mar 02, 2023
GSE80527	The BET protein BRD2 cooperates with CTCF to enforce a transcriptional boundary	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BIGWIG BROADPEAK SRA Run Selector	Gerd A Blobel	Mar 31, 2017
GSE95804	The BET protein BRD2 cooperates with CTCF to enforce transcriptional and architectural boundaries	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	12	BIGWIG BROADPEAK	Gerd A Blobel	Mar 31, 2017
GSE242719	Reversible internalization of cytoplasm into the nucleus in senescent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	55	BROADPEAK BW NARROWPEAK TSV TXT	Dimitrios Botskaris	Sep 12, 2023
GSE166674	A comprehensive transcriptome signature of murine hematopoietic stem cell aging	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BROADPEAK CSV NARROWPEAK SRA Run Selector	Leonid Bystrykh	Apr 02, 2021
GSE121198	ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	51	BROADPEAK TAB	Ronald L. Chandler	Jul 01, 2019
GSE129783	ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion [Mouse_ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BROADPEAK TXT SRA Run Selector	Ronald L. Chandler	Jul 01, 2019
GSE152663	SWI/SNF inactivation in the endometrial epithelium leads to loss of epithelial integrity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	BROADPEAK TAB	Ronald L. Chandler	Oct 20, 2020
GSE129745	Chromatin structure profiling of mouse muscle stem cells by ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BROADPEAK BW SRA Run Selector	Tom Cheung	Dec 08, 2020
GSE129749	Histone modifications in activated and quiescent mouse muscle stem cells by ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BROADPEAK BW NARROWPEAK SRA Run Selector	Tom Cheung	Dec 08, 2020
GSE129768	A Long Noncoding RNA, LncMyod, Regulates Myogenic Lineage Progression by Modulating Chromatin Accessibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BROADPEAK BW	Tom Cheung	Dec 08, 2020
GSE224513	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BIGWIG BROADPEAK BW MTX NARROWPEAK TSV	Christopher Russell Chin	Feb 19, 2024
GSE260811	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas [Mint-ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BROADPEAK BW NARROWPEAK	Christopher Russell Chin	Mar 05, 2024
GSE185215	A phenotypic screening platform for identifying chemical modulators of astrocyte reactivity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	97	BROADPEAK BW MTX NARROWPEAK TSV	Benjamin L.L. Clayton	Jan 10, 2024
GSE231598	A phenotypic screening platform for identifying chemical modulators of astrocyte reactivity [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BROADPEAK BW NARROWPEAK	Benjamin L.L. Clayton	Jan 10, 2024