GEO Browser - GEO

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202 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			BEDGRAPH
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE90034	Srf destabilizes cell identity	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	41	BEDGRAPH BW CEL TXT	Takashi Ikeda	Apr 18, 2018
GSE158673	EBF1 and Pax5 safeguard leukemic transformation by limiting IL-7 signaling, Myc expression and folate metabolism	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	110	BEDGRAPH CSV TXT	Senthilkumar Ramamoorthy	Oct 19, 2020
GSE59176	Prevalent p53 gain-of-function mutants co-opt epigenetic pathways to drive cancer growth	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	15	BEDGRAPH BW TXT SRA Run Selector	Morgan Sammons	Jul 31, 2015
GSE64825	Genome-wide distribution and function of ATP-dependent chromatin remodelers in embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	44	BEDGRAPH BW WIG SRA Run Selector	Matthieu GERARD	Jan 26, 2016
GSE72087	Characterization of chromatin and gene expression changes during fasting in mouse liver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BEDGRAPH CSV FPKM_TRACKING	Songjoon Baek	Dec 20, 2016
GSE72164	Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	76	BEDGRAPH BEDPE BW TXT SRA Run Selector	Shuang-Yin Wang	Dec 07, 2015
GSE72856	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH	Francesco Neri	Feb 25, 2017
GSE76934	Reversible transitions between transformed and differentiated states in AML	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH TXT	Ruijie Liu	May 13, 2019
GSE79520	The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BEDGRAPH TXT	Aikaterini Nanou	Nov 30, 2016
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE82199	LTR-retrotransposon control by tRNA-derived small RNA	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	54	BEDGRAPH TXT SRA Run Selector	Robert A Martienssen	Jun 29, 2017
GSE85505	KAT–independent gene regulation by Tip60 promotes ESC self-renewal but not pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	BEDGRAPH SRA Run Selector	Thomas Fazzio	Apr 06, 2017
GSE89520	Lamins organize the three dimensional genome from nuclear periphery in ES cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Mus musculus	40	BEDGRAPH TXT SRA Run Selector	Yixian Zheng	Nov 01, 2017
GSE90017	Transcriptional and cistromic profiling of mouse nephron progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BEDGRAPH BW TXT	Andrew P McMahon	Jan 17, 2018
GSE90561	Sox2 is required for functional chromatin connectivity in brain-derived neural stem cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BED BEDGRAPH BEDPE TXT	Federico Zambelli	Mar 07, 2019
GSE92412	Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	194	BEDGRAPH BIGWIG BW	Hendrik G Stunnenberg	Apr 30, 2019
GSE92434	RNA- and ATAC-seq data of Wt, Ebf1-KO and Pax5-KO FL-ProB-cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	18	BEDGRAPH TXT SRA Run Selector	Mikael Sigvardsson	Jun 08, 2018
GSE94431	Capturing the onset of PRC2-mediated repressive domain formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	107	BEDGRAPH BW	Danny Reinberg	Jun 21, 2018
GSE95664	Differential programming of intestinal tissues in SETD2-/- mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BEDGRAPH BW TXT	Ni Li	Sep 01, 2017