GEO Browser - GEO

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203 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing			BEDGRAPH
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE111190	4Cseq analysis of neural stem/progenitor cells (NSC) from wild type and Sox2-deleted mouse neonatal forebrain	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	46	BEDGRAPH SRA Run Selector	Federico Zambelli	Mar 07, 2019
GSE123388	A Preformed Chromatin Architecture Ensures Robust Shh Transcription during Limb Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	54	BEDGRAPH BW	Christina Paliou	May 13, 2019
GSE167487	A Variant in Human AIOLOS Impairs Adaptive Immunity by Interfering with IKAROS	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BEDGRAPH NARROWPEAK TXT SRA Run Selector	Motoi Yamashita	May 01, 2021
GSE138514	A complex regulatory landscape involved in the development of external genitals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BED BEDGRAPH	Ana Rita Amandio Lhopitallier	Apr 25, 2020
GSE138513	A complex regulatory landscape involved in the development of external genitals [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED BEDGRAPH SRA Run Selector	Ana Rita Amandio Lhopitallier	Apr 25, 2020
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE198775	A genome-wide relay of signalling-responsive enhancers drives hematopoietic specification	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	73	BED BEDGRAPH H5	Peter Keane	Dec 09, 2022
GSE83293	A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	77	BEDGRAPH BIGWIG BW	Ross Hardison	Jun 15, 2016
GSE128001	AMPK links acetyl-coA homeostasis to BET recruitment in acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BEDGRAPH	Daisuke Nakada	Sep 05, 2019
GSE156855	AP-1 and TGFb cooperativity drives non-canonical Hedgehog signaling in resistant basal cell carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	38	BEDGRAPH	Anthony Oro	Aug 25, 2020
GSE124588	ATAC-Seq examining the TFH and TEFF primed in Wild-type and IL6 KO mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BEDGRAPH SRA Run Selector	Andre Ballesteros-Tato	Jul 17, 2019
GSE218142	ATAC-seq of bone marrow ILC2 lineages and Lung ILC2 steady state	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BEDGRAPH	Arifumi Iwata	May 14, 2024
GSE132240	ATAC-seq of dendritic cell progenitors	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BEDGRAPH SRA Run Selector	Vivek Durai	Jun 23, 2019
GSE108944	ATAC-seq time course in mouse acute myeloid leukemia cells upon PU.1 restoration and knockdown	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH SRA Run Selector	Ruijie Liu	May 13, 2019
GSE158671	ATACSeq and genome-wide binding profile of EBF1 and Pax5 to unravel molecular networks driving leukemia in Ebf1+/-Pax5+/- (dHet) B-ALL mice.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BEDGRAPH SRA Run Selector	Senthilkumar Ramamoorthy	Oct 19, 2020
GSE180937	Aire regulates chromatin looping by evicting CTCF from domain boundaries and favoring accumulation of cohesin on super-enhancers	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	33	BEDGRAPH BIGWIG	CBDM Lab	Jul 30, 2021
GSE142469	Analysis of AP-1 regulation on Smad3 genome-wide DNA binding sites in resistant basal cell carcinoma	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH SRA Run Selector	Anthony Oro	Aug 25, 2020
GSE207997	Analysis of Polycomb Repressive Complex 1 subunits across cell cycle in pluripotent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	53	BEDGRAPH BIGWIG TAR	Jordi Martorell-Marugan	Dec 02, 2022
GSE155102	Arid1a is essential in cardiomyocytes for neonatal heart maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH	Cornelis J. Boogerd	Jul 05, 2023