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61 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Genome binding/occupancy profiling by high throughput sequencing			BW
GSE143266	An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BROADPEAK BW SRA Run Selector	Ross Hardison	Jan 09, 2020
GSE163718	Coordination of two enhancers drives expression of olfactory trace amine-associated receptors VI	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Qian Li	Mar 08, 2021
GSE104098	The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [ChIP-Seq 2]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BW SRA Run Selector	Bo Wen	Dec 03, 2017
GSE162476	ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [mASPS_ChIP, ASPL_VCP_Pol2]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BW WIG SRA Run Selector	Jinxiu Li	Jan 01, 2023
GSE161699	Splicing regulation of large exons secures phase-separation of transcription factors in vertebrates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW	Akio Masuda	Jul 20, 2021
GSE95113	The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [ChIP-Seq 1]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED BW SRA Run Selector	Bo Wen	Dec 03, 2017
GSE97866	Tissue-specific CTCF/Cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo (ATAC-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW SRA Run Selector	Jelena M Telenius	Jun 14, 2017
GSE103297	GLIS3 is indispensable for TSH/TSHR-dependent thyroid hormone biosynthesis and follicular cell proliferation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	10	BW TXT	Raja Jothi	Aug 30, 2017
GSE49137	INO80 complex in the core regulatory network governing ESC self-renewal [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BW SRA Run Selector	Li Wang	May 16, 2014
GSE58101	High-resolution mapping of chromatin packaging in mouse embryonic stem cells and sperm	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BW TXT SRA Run Selector	Benjamin R Carone	Jul 08, 2014
GSE62151	Upstream Anti-sense Promoters Act as Local Enhancers of Mammalian Protein-coding Genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH BW WIG SRA Run Selector	Karen Adelman	Jun 23, 2015
GSE206092	ISL1 controls pancreatic alpha cell fate and regulates beta cell differentiation and maturation [CUT&Tag]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BW	Šárka Benešová	Jun 17, 2022
GSE49252	INO80 complex in the core regulatory network governing ESC self-renewal	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW TXT	Li Wang	May 16, 2014
GSE211232	Multipartite super-enhancers function in an orientation-dependent manner [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BW	Mira Tony Kassouf	Aug 18, 2022
GSE110604	Characterization of tissue-specific BMAL1 cistromes reveals new roles for enhancer-enhancer interactions in regulating rhythmic transcription	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BED BW	Jerome Menet	May 08, 2018
GSE95116	The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BW HIC TXT	Bo Wen	Dec 03, 2017
GSE163365	Targeting BMI-1 in B cells restores effective humoral immune responses and controls chronic viral infection	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	28	BW	Andrea Di Pietro	Oct 11, 2021
GSE242974	The role of SMC3 in heart development by regulating super-enhancer associated genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BED BEDGRAPH BW MTX TSV XLS XLSX	bowen zhang	Sep 14, 2023
GSE92590	Simultaneous transcriptional and epigenomic profiling from specific cell types within heterogeneous tissues in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BW SRA Run Selector	Evan Rosen	Jan 24, 2017
GSE236182	Kdm1a safeguards the topological boundaries of PRC2-repressed genes and prevents aging-related euchromatinization in neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	37	BEDGRAPH BEDPE BIGWIG BW HIC TXT WIG	Sergio Niñerola	Dec 04, 2023