GEO Browser - GEO

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265 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by genome tiling array			GFF
GSE8667	Genome-wide Analysis of KAP1 Binding Suggests Auto-regulation of KRAB-ZNFs	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Homo sapiens	78	GFF TXT	Kimberly Rose Blahnik	Sep 29, 2007
GSE9535	Identifying targets of Klf2, Klf4, Klf5 and p53 in mouse embryonic stem cells	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Mus musculus	33	GFF PROBE	jun cai	Feb 11, 2008
GSE13315	Identifying Sites Bound by Epstein Barr Nuclear Antigen 1 (EBNA1) in the Human Genome	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Homo sapiens	5	CEL CHP GFF TXT	Bill Sugden	Jan 01, 2009
GSE14640	A condensin-like dosage compensation complex acts at a distance to control expression throughout the genome	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Caenorhabditis elegans	42	CEL GFF PAIR PDF TXT	Barbara J. Meyer	Mar 01, 2009
GSE18457	ChIP-chip from HCT116 cells treated with MMS and LNCaP cells with ATF3	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Homo sapiens	10	BAR BED GFF PAIR PDF TXT XLS	Yujiro Tanaka	Oct 01, 2010
GSE18737	Epigenetic chromatin states uniquely define the developmental plasticity of murine hematopoietic stem cells	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Mus musculus	83	CEL GFF PAIR	Joanne Attema	Nov 09, 2009
GSE23030	Autocatalytic differentiation of epigenetic modifications within the Arabidopsis genome	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	12	CALLS GFF PAIR	Soichi Inagaki	Sep 21, 2010
GSE24507	Gene expression and H3K27 tri-methylation analysis of meristematic tissue (Me) and young leaves (Le) isolated by manual dissection of clv3-9 plants	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	8	GFF PAIR TXT	Daniel Schubert	Apr 20, 2011
GSE25834	An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expression	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Caenorhabditis elegans	53	CEL CHP GFF PAIR	Barbara J. Meyer	Mar 01, 2011
GSE26020	Crosstalk between gene body DNA methylation, H3K9me3 and H3K36me3 chromatin marks and transcription	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Homo sapiens	24	CEL CHP GFF PAIR	Xiwei Wu	Mar 31, 2011
GSE26947	Chromosome wide analysis of parental allele specific chromatin and DNA methylation in mouse	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Mus musculus	46	CEL CHP GFF PAIR	Xiwei Wu	Mar 31, 2011
GSE30761	Mammalian X upregulation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Mus musculus Mus musculus x Mus spretus	60	BED BIGWIG CEL GFF PAIR TXT	Xinxian Deng	Jul 19, 2011
GSE36403	Profiles of Epigenetic Histone Post-translational Modifications at Type 1 Diabetes Susceptible Genes	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Homo sapiens	25	CEL GFF PAIR	Nancy Chen	Jun 01, 2012
GSE36927	Topoisomerase II is required for proper dosage compensation in Drosophila	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	6	GFF PAIR	Edward Ramos	Mar 30, 2012
GSE39895	PGC methylome analysis revealed large, germline-specific mouse hypomethylated DNA domains with unique genomic and epigenomic features	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Mus musculus	70	GFF PAIR TXT	Rieko Ikeda	Jul 01, 2013
GSE41195	Genome-scale Analysis of E. coli FNR Reveals Complex Features of Transcription Factor Binding	Expression profiling by array Expression profiling by genome tiling array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12 Escherichia coli str. K-12 substr. MG1655 Escherichia coli str. K-12 substr. MG1655star	48	CALLS GFF PAIR TXT WIG	Kevin S Myers	Jun 20, 2013
GSE46415	The response regulator ArcA uses a diverse binding site architechture to globally regulate carbon oxidation in E. coli	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12 Escherichia coli str. K-12 substr. MG1655	13	GFF PAIR TXT WIG	Dan Park	Oct 17, 2013
GSE47076	Analysis of expression and epigenetic changes in human colorectal cancer and matching mucosa tissues	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Homo sapiens	56	CEL GFF PAIR	Xiwei Wu	Dec 31, 2013
GSE47689	Nuclear phosphatidylinositol-5-phosphate regulates ING2 stability at discrete chromatin targets in response to DNA damage	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Homo sapiens	16	GFF PAIR	Dennis Jacob Bua	Dec 31, 2013
GSE48383	ChIp-Chip using RNAP II, CREB C/EBPb and cJun antibody in undifferentiated or differentiated keratinocytes	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Mus musculus	26	CEL CHP GFF PAIR	Julian Rozenberg	Jul 01, 2013