GEO Browser - GEO

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1258 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by array			PAIR
GSE31407	Drosophila DrosDel deficiency and diploid control flies	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Drosophila melanogaster	203	BAM PAIR SAM	Brian Oliver	Apr 03, 2012
GSE18457	ChIP-chip from HCT116 cells treated with MMS and LNCaP cells with ATF3	Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Homo sapiens	10	BAR BED GFF PAIR PDF TXT XLS	Yujiro Tanaka	Oct 01, 2010
GSE29064	Structural mapping of regulatory function of histone H3 and H4 residues	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Saccharomyces cerevisiae	135	BED PAIR TXT	Inkyung Jung	Dec 05, 2012
GSE30741	Kc cells from Drosophila melanogaster during ecdysone treatment and CP190 knockdown	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	26	BED PAIR WIG	Ashley M Wood	Oct 14, 2011
GSE30761	Mammalian X upregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Mus musculus Mus musculus x Mus spretus	60	BED BIGWIG CEL GFF PAIR TXT	Xinxian Deng	Jul 19, 2011
GSE31939	VDR/RXR and TCF4/beta-Catenin Cistromes in Colonic Cells of Colorectal Tumor Origin: Impact on c-FOS and c-MYC Gene Expression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	19	BED CALLS PAIR TIFF TXT SRA Run Selector	Mark B Meyer	Nov 22, 2011
GSE34941	Integrative Epigenomic Analysis Identifies Biomarkers and Therapeutic Targets in Adult B-Acute Lymphoblastic Leukemia	Expression profiling by array Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	428	BED BIGWIG PAIR	Huimin Geng	Nov 27, 2012
GSE41955	The RUNX2 Cistrome in Osteoblasts: Characterization, Downregulation Following Differentiation and Relationship to Gene Expression	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BED BEDGRAPH CALLS PAIR	Mark B Meyer	Apr 24, 2014
GSE45282	Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Non-coding RNA profiling by array	Mus musculus	32	BED CALLS PAIR TSV	Abhinav Nellore	Apr 11, 2013
GSE51515	Genomic Determinants of Gene Regulation by 1,25-Dihydroxyvitamin D3 During Osteoblast-Lineage Cell Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	28	BED BEDGRAPH CALLS PAIR	Mark B Meyer	Jun 02, 2014
GSE58071	Dysregulation of gene expression as the cause of Cockayne syndrome neurologic disease	Expression profiling by array	Homo sapiens	64	BED PAIR	Yuming Wang	Sep 22, 2014
GSE60859	The transcription factor FOXL2 mobilizes estrogen signaling in the maintenance of ovarian granulosa cells identity	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34	BED PAIR TXT WIG	Adrien Georges	Oct 28, 2014
GSE27538	LATE-REPLICATING HETEROCHROMATIN IS CHARACTERISED BY DECREASED CYTOSINE METHYLATION IN THE HUMAN GENOME	Expression profiling by array Methylation profiling by genome tiling array	Homo sapiens	4	BEDGRAPH PAIR	John Greally	Aug 06, 2011
GSE38771	Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	13	BEDGRAPH CALLS PAIR TAB	Peter J Park	Jul 16, 2012
GSE40540	IP of 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) enriched DNA fragments from control and PB treated mouse livers	Methylation profiling by genome tiling array Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	153	BEDGRAPH CEL PAIR	John Paterson Thomson	Sep 12, 2012
GSE43103	H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Mus musculus	33	BEDGRAPH PAIR TXT WIG	Gillian Taylor	Aug 23, 2013
GSE44278	Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of polycomb-target genes	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH PAIR	James P Reddington	Feb 12, 2013
GSE46630	The newly identified transcription factor M1BP ad GAGA factor orchestrate distinct mechanisms of transcriptional regulation on paused genes	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	10	BEDGRAPH PAIR	David Scott Gilmour	Aug 13, 2013
GSE59064	Nucleosome occupancy changes in mammalian cell differentiation and reprogramming	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BEDGRAPH PAIR	Robert E Kingston	Jul 31, 2014
GSE126884	Repression of germline genes in C. elegans somatic tissues by H3K9 dimethylation of their promoters	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	91	BEDGRAPH BROADPEAK GFF GPR NARROWPEAK PAIR WIG	Lisa N. Petrella	Feb 22, 2019