GEO Browser - GEO

Series

Samples

Platforms

DataSets

476 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Bos taurus		SRA Run Selector
GSE102736	Consequences of supplying methyl donors during pregnancy on the methylome of the offspring from lactating and non-lactating dairy cattle	Methylation profiling by high throughput sequencing	Bos taurus	10	BB SRA Run Selector	Alex Bach	Aug 17, 2017
GSE47843	Sequencing and genome-wide mapping of 146 bp mono-nucleosomal DNA from human and bovine sperm	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Homo sapiens	4	BED SRA Run Selector	Birgit Samans	Jul 08, 2014
GSE61936	Genome-wide H3K4me3 analysis in Angus cattle with divergent tenderness	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	2	BED BEDGRAPH TXT SRA Run Selector	Jose Adrian Carrillo	Mar 31, 2015
GSE67620	Identification of novel, highly expressed retroviral microRNAs in cells infected by bovine foamy virus	Non-coding RNA profiling by high throughput sequencing	Bos taurus	2	BED SRA Run Selector	Adam Wesley Whisnant	Apr 07, 2015
GSE74026	Differential DNA Methylation Analysis without a Reference Genome	Methylation profiling by high throughput sequencing	Bos taurus Cyprinus carpio Homo sapiens	44	BED FA SRA Run Selector	Christoph Bock	Dec 03, 2015
GSE81488	In fetal testis, SOX9 acts on transcription and splicing of its targets genes through binding to genomic regions with conserved signatures [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Mus musculus	6	BED SRA Run Selector	Francis Poulat	Dec 15, 2016
GSE85836	Genome-wide mapping of MAT2A-associsted regions in bovine blastocysts	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	6	BED SRA Run Selector	Shuntaro Ikeda	Jun 19, 2017
GSE106538	Genome-wide sequencing and comparative profiling of cattle sperm DNA methylome	Methylation profiling by high throughput sequencing	Bos taurus	10	BED SRA Run Selector	Yang Zhou	Mar 08, 2018
GSE119263	Comparative sperm methylome analysis provide insights into complex phenotypes and epigenome evolution	Methylation profiling by high throughput sequencing	Bos taurus	18	BED SRA Run Selector	Lingzhao Fang	Mar 20, 2019
GSE129420	Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation [dataset 5]	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	9	BED SRA Run Selector	George E. Liu	Jul 24, 2019
GSE129421	Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation [dataset 6]	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	9	BED SRA Run Selector	George E. Liu	Jul 24, 2019
GSE129422	Systematic Discovery and Characterization of Chromatin States and Butyrate-induced Variations for Cattle Genome Functional Annotation [dataset 7]	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	9	BED SRA Run Selector	George E. Liu	Jul 24, 2019
GSE129760	Establishment of bovine expanded potential stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Bos taurus	12	BED TXT SRA Run Selector	Yuxuan Zheng	Apr 12, 2021
GSE131850	Divergences of sperm DNA methylomes between monozygotic twin seed bulls reveal fertility-related genes (WGBS)	Methylation profiling by high throughput sequencing	Bos taurus	2	BED SRA Run Selector	Shengli Zhang	Jan 01, 2020
GSE157053	Profiling of histone modifications in bovine embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	4	BED BW SRA Run Selector	Michelle M Halstead	Aug 29, 2020
GSE158414	Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (ATAC-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Sus scrofa	31	BED SRA Run Selector	Colin Kern	Sep 24, 2020
GSE158416	Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (CTCF ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Gallus gallus Sus scrofa	48	BED SRA Run Selector	Colin Kern	Sep 24, 2020
GSE158418	Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (H3K27ac ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Gallus gallus Sus scrofa	48	BED SRA Run Selector	Colin Kern	Sep 24, 2020
GSE158419	Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (H3K27me3 ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Gallus gallus Sus scrofa	48	BED SRA Run Selector	Colin Kern	Sep 24, 2020
GSE158427	Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (H3K4me1 ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Gallus gallus Sus scrofa	48	BED SRA Run Selector	Colin Kern	Sep 24, 2020