GEO Browser - GEO

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165 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Equus caballus
GSE223748	Mammalian Methylation Consortium	Methylation profiling by array	Zapus princeps Zalophus californianus Xanthonycticebus pygmaeus Vulpes vulpes Vombatus ursinus Vicugna pacos Varecia variegata Varecia rubra Ursus americanus Urocitellus columbianus Tursiops truncatus Tursiops aduncus Tupaia tana Tupaia longipes Tupaia gracilis Tupaia belangeri Trichechus manatus Tragelaphus strepsiceros Tragelaphus spekii Tragelaphus oryx Tragelaphus imberbis Tragelaphus eurycerus Tragelaphus angasii Trachypithecus francoisi Tolypeutes matacus Tenrec ecaudatus Tamiasciurus hudsonicus Tamiasciurus douglasii Tamias townsendii Tamias striatus Tamias amoenus Tamandua tetradactyla Tamandua mexicana Talpa occidentalis Tadarida brasiliensis Tachyglossus aculeatus Sylvilagus nuttallii Sylvilagus floridanus Sylvilagus brasiliensis Sylvilagus bachmani Sylvilagus audubonii Sus scrofa domesticus Sus scrofa Suricata suricatta Suncus varilla Suncus murinus Steno bredanensis Sorex vagrans Sorex tundrensis Sorex trowbridgii Sorex roboratus Sorex palustris Sorex minutissimus Sorex isodon Sorex hoyi Sorex cinereus Sorex caecutiens Smutsia temminckii Setifer setosus Sciurus niger Sciurus carolinensis Scapanus orarius Scalopus aquaticus Sarcophilus harrisii Saccopteryx bilineata Rousettus aegyptiacus Rhynchonycteris naso Rhombomys opimus Rhinopoma hardwickii Rhinolophus ferrumequinum Rhinolophus alcyone Rhinoceros unicornis Rhabdomys pumilio Rattus rattus Rattus norvegicus Puma concolor Pteropus vampyrus Pteropus rodricensis Pteropus pumilus Pteropus poliocephalus Pteropus hypomelanus Pteropus giganteus Propithecus tattersalli Propithecus diadema Propithecus coquereli Procavia capensis Pongo pygmaeus Plecotus auritus Pipistrellus pipistrellus Physeter catodon Phyllostomus hastatus Phyllostomus discolor Phodopus roborovskii Phodopus campbelli Phocoena phocoena Phoca vitulina Phoca groenlandica Phascolarctos cinereus Peromyscus polionotus Peromyscus maniculatus Peromyscus leucopus Peromyscus eremicus Peromyscus californicus Perodicticus potto Parascalops breweri Paraechinus hypomelas Paraechinus aethiopicus Papio hamadryas Panthera tigris Panthera leo Pan troglodytes Ovis aries Otolemur crassicaudatus Osphranter rufus Osphranter robustus Oryctolagus cuniculus Orycteropus afer Ornithorhynchus anatinus Orientallactaga sibirica Oreamnos americanus Orcinus orca Ondatra zibethicus Okapia johnstoni Odocoileus virginianus Odobenus rosmarus divergens Ochotona rufescens Ochotona princeps Ochotona pallasi Ochotona hyperborea Ochotona dauurica Ochotona alpina Nycticeius humeralis Nycticebus coucang Nyctalus noctula Nothocricetulus migratorius Notamacropus rufogriseus Notamacropus eugenii Notamacropus agilis Neurotrichus gibbsii Nesogale talazaci Neotoma cinerea Neophoca cinerea Neomys fodiens Neogale vison Napaeozapus insignis Nannospalax galili Nannospalax ehrenbergi Nanger soemmerringii Nanger granti Nanger dama Myotis yumanensis Myotis vivesi Myotis thysanodes Myotis nattereri Myotis myotis Myotis lucifugus Myotis evotis Myotis brandtii Myodes rufocanus Myocastor coypus Mustela putorius furo Mustela frenata Mustela altaica Mus musculus Mus minutoides Muntiacus vaginalis Mops pumilus Monodelphis domestica Molossus molossus Mirza zaza Microtus richardsoni Microtus pennsylvanicus Microtus ochrogaster Microtus guentheri Microgale thomasi Microgale drouhardi Microgale cowani Microcebus murinus Micaelamys namaquensis Mesoplodon bidens Mesocricetus auratus Meriones unguiculatus Meriones rex Meriones libycus Megaptera novaeangliae Martes americana Marmota monax Marmota flaviventris Macroscelides proboscideus Macropus giganteus Macropus fuliginosus Macaca mulatta Lynx rufus Lycaon pictus Loxodonta africana Loris tardigradus Litocranius walleri Lepus californicus Lepus americanus Leptonycteris yerbabuenae Lemur catta Lasiopodomys mandarinus Lasiopodomys gregalis Lasiopodomys brandtii Lagenorhynchus obliquidens Lagenorhynchus albirostris Kobus megaceros Jaculus jaculus Ictidomys tridecemlineatus Hystrix cristata Hylomys suillus Hydrochoerus hydrochaeris Homo sapiens Hippotragus niger Hippotragus equinus Hipposideros ruber Heterocephalus glaber Hemiechinus auritus Hemicentetes semispinosus Hapalemur griseus Gorilla gorilla Globicephala macrorhynchus Glaucomys sabrinus Giraffa camelopardalis Gerbillus nanus Gerbillus cheesmani Georychus capensis Gazella leptoceros Galeopterus variegatus Galea musteloides leucoblephara Galea musteloides Galago moholi Fukomys damarensis Felis catus Eumetopias jubatus Eulemur sanfordi Eulemur rufus Eulemur rubriventer Eulemur mongoz Eulemur macaco Eulemur fulvus collaris Eulemur fulvus Eulemur flavifrons Eulemur coronatus Eulemur albifrons Eudorcas thomsonii Erinaceus europaeus Erethizon dorsatum Equus quagga Equus grevyi Equus caballus Equus asinus somalicus Eptesicus fuscus Eozapus setchuanus Enhydra lutris Ellobius talpinus Elephas maximus Elephantulus myurus Elephantulus edwardii Eidolon helvum Echinops telfairi Dromiciops gliroides Dipus sagitta Didelphis virginiana Didelphis marsupialis Diceros bicornis Desmodus rotundus Dendrohyrax arboreus Delphinus delphis Delphinapterus leucas Daubentonia madagascariensis Dasypus novemcinctus Cynopterus brachyotis Cyclopes didactylus Cuniculus paca Ctenomys steinbachi Ctenomys opimus Ctenomys lewisi Cryptomys hottentotus Crocuta crocuta Crocidura cyanea Cricetulus longicaudatus Cricetulus griseus Cricetulus barabensis Cricetomys gambianus Connochaetes taurinus albojubatus Condylura cristata Clethrionomys gapperi Chrysocyon brachyurus Choloepus hoffmanni Choloepus didactylus Chlorocebus sabaeus Chinchilla lanigera Cheirogaleus medius Chaetophractus villosus Cervus elaphus Cervus canadensis Ceratotherium simum simum Cephalorhynchus hectori maui Cephalorhynchus hectori hectori Cephalorhynchus commersonii Cavia tschudii Cavia porcellus Cavia aperea Castor canadensis Carollia perspicillata Capreolus capreolus Capra hircus Canis lupus familiaris Canis latrans Callospermophilus saturatus Callospermophilus lateralis Callithrix jacchus Callithrix geoffroyi Caenolestes fuliginosus Cabassous unicinctus Bradypus variegatus Bos taurus Blarina brevicauda Bathyergus suillus Bathyergus janetta Balaenoptera musculus Balaenoptera borealis Balaena mysticetus Atelerix albiventris Asellia tridens Arvicanthis niloticus Artibeus jamaicensis Apodemus uralensis Apodemus sylvaticus Apodemus peninsulae Apodemus agrarius Aplodontia rufa Aonyx cinereus Antrozous pallidus Antidorcas marsupialis Amblysomus hottentotus Alticola semicanus Alticola barakshin Alexandromys oeconomus Alexandromys mongolicus Alexandromys maximowiczii Alexandromys fortis Aepyceros melampus Addax nasomaculatus Acomys cahirinus Acinonyx jubatus	15043	CSV DOCX IDAT	Steve Horvath	Aug 05, 2023
GSE33360	Discovery of novel microRNAs in rat kidney using microarray analyses	Non-coding RNA profiling by array	Xenopus tropicalis Xenopus laevis Tetraodon nigroviridis Takifugu rubripes Taeniopygia guttata Symphalangus syndactylus Sus scrofa Saguinus labiatus Rhinopithecus bieti Rattus norvegicus Pongo pygmaeus Petromyzon marinus Pan troglodytes Pan paniscus Ovis aries Oryzias latipes Ornithorhynchus anatinus Mus musculus Macaca nemestrina Macaca mulatta Homo sapiens Gallus gallus Equus caballus Danio rerio Canis lupus familiaris Bos taurus Ateles geoffroyi	6	TXT	Fanxue Meng	Nov 02, 2011
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Ursus americanus Tamias sibiricus Tadarida brasiliensis Sus scrofa Suncus murinus Rattus norvegicus Petaurus breviceps Peromyscus leucopus Oryctolagus cuniculus Mus musculus Murina leucogaster Mesocricetus auratus Meriones unguiculatus Meles meles Felis catus Erinaceus europaeus Equus caballus Chlorocebus aethiops Cavia porcellus Capra hircus Canis lupus familiaris Bos taurus Acomys cahirinus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE142238	Cross-species analysis of melanoma enhancer logic using deep learning	Genome binding/occupancy profiling by high throughput sequencing	Sus scrofa domesticus Mus musculus Homo sapiens Equus caballus Danio rerio Canis lupus familiaris	23	BW SRA Run Selector	Stein Aerts	Apr 22, 2020
GSE126424	Cross-species association of microRNA expression in mammary epithelial cells with stem/progenitor characteristics and cancer susceptibility	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Sus scrofa Rattus norvegicus Homo sapiens Equus caballus Canis lupus familiaris Bos taurus	24	CSV SRA Run Selector	Praveen Sethupathy	Feb 04, 2023
GSE63330	DNA methylation in mammalian placentas	Methylation profiling by high throughput sequencing	Saimiri boliviensis Mus musculus Monodelphis domestica Macaca mulatta Homo sapiens Equus caballus Canis lupus familiaris Bos taurus	20	TAR SRA Run Selector	Janine LaSalle	Aug 05, 2015
GSE174767	Methylation studies in horses	Methylation profiling by array	Rattus norvegicus Mus musculus Homo sapiens Equus caballus	333	IDAT TXT	Steve Horvath	Nov 25, 2021
GSE77543	Dynamics of NRSF/REST motif evolution favor the canonical NRSE/RE1 form	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Equus caballus Canis lupus familiaris	9	TXT SRA Run Selector	Shan Jiang	Jan 01, 2024
GSE157436	An Evolutionary Cancer Epigenetic approach revealed DNA hypermethylation of Ultra-Conserved Non-coding Elements in squamous cell carcinoma of different mammalian species	Methylation profiling by high throughput sequencing	Meles meles Hystrix cristata Homo sapiens Felis catus Equus caballus Canis lupus familiaris Bos taurus	120	XLSX SRA Run Selector	Luca Morandi	Sep 04, 2020
GSE44736	Dexamethasone Acutely Down-regulates Genes Involved in Steroidogenesis in Stallion Testes	Expression profiling by array	Homo sapiens Equus caballus	6	TXT	Nancy Ing	May 01, 2013
GSE73937	Differential expression of microRNAs in bovine papillomavirus type 1 (BPV-1) transformed equine cells	Non-coding RNA profiling by array	Homo sapiens Equus caballus	6	TXT	Nuria Terron Canedo	Oct 14, 2015
GSE163049	Interdependence between histone marks and steps in Pol II transcription	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Equus caballus	90	BW	Charles G Danko	Dec 12, 2020
GSE128373	Genome-wide SNP data of Chinese indigenous horse breed (additional horse samples)	Genome variation profiling by SNP array	Equus przewalskii Equus caballus Equus asinus	24	IDAT TXT	Hongying Ma	Mar 16, 2019
GSE128376	Genome-wide SNP data of Chinese indigenous horse breed	Genome variation profiling by SNP array	Equus przewalskii Equus caballus Equus asinus	312	IDAT TXT	Hongying Ma	Mar 16, 2019
GSE30243	Profiling of differential allelic expression in horse, donkey, mule and hinny placental tissue	Expression profiling by high throughput sequencing	Equus caballus x Equus asinus Equus caballus Equus asinus x Equus caballus Equus asinus	4	SAM SRA Run Selector	Andrew Clark	May 24, 2013
GSE36352	Profiling of differential allelic expression in horse, donkey, mule, and hinny placental tissues.	Expression profiling by high throughput sequencing	Equus caballus x Equus asinus Equus caballus Equus asinus x Equus caballus Equus asinus	15	TXT SRA Run Selector	Andrew Clark	May 29, 2012
GSE7360	Equine Laminitis vs Control.	Expression profiling by array	Equus caballus Bos taurus	6	CEL CHP	Murat T Budak	Mar 22, 2008
GSE10303	Differential Gene Expression Associated With Postnatal Articular Cartilage Maturation	Expression profiling by array	Equus caballus	4	GPR	Michael J. Mienaltowski	Nov 10, 2008
GSE11760	Transcriptional profiling differences for articular cartilage and repair tissue in equine joint surface lesions.	Expression profiling by array	Equus caballus	8	GPR	Michael J. Mienaltowski	Sep 10, 2009
GSE14252	Comparative Analyses: Expression Differences for Repair Tissue, Chondrocytes, and Mesenchymal Stromal Cells	Expression profiling by array	Equus caballus	12	GPR TXT	Michael J. Mienaltowski	Mar 30, 2010