GEO Browser - GEO

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43 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		RPKM
GSE237630	Near-cognate tRNAs increase the efficiency and precision of pseudouridine-mediated readthrough of premature termination codons [tRNA-seq]	Non-coding RNA profiling by high throughput sequencing	Homo sapiens	26	XLSX RPKM	Wenqing Liu	Jan 29, 2024
GSE35842	RIP-seq analysis of eukaryotic Sm proteins identifies three major categories of Sm-containing ribonucleoproteins	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	28	WIG TXT RPKM BEDGRAPH SRA Run Selector	Zhipeng Lu	Dec 01, 2013
GSE59090	ChIP-seq and RNA-seq analysis of PRC2 core subunits in primary human erythroid progenitor cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	30	WIG RPKM BED	Jian Xu	Jan 01, 2015
GSE71577	Intrinsic histone acetyltransferase activity of BRD4 is responsible for nucleosome eviction and transcriptional activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	WIG RPKM SRA Run Selector	Dinah S. Singer	May 08, 2016
GSE39229	Mapping Epigenomic Type-Specific Differences Occurring During Hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	TXT RPKM BED	Brian J Abraham	Mar 25, 2013
GSE44267	Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	18	TXT RPKM BW SRA Run Selector	Jesse R Dixon	Dec 16, 2013
GSE54879	RNA-sequencing analysis of NGN3-GFP positive and negative cells purified from differentiating human embryonic stem cells	Expression profiling by high throughput sequencing	Homo sapiens	2	TXT RPKM SRA Run Selector	ilmen zhang	Sep 12, 2014
GSE61476	FOXG1-dependent dysregulation of GABA/glutamate neuron differentiation in autism spectrum disorders	Expression profiling by high throughput sequencing	Homo sapiens	45	TXT RPKM SRA Run Selector	Flora Vaccarino	Jul 16, 2015
GSE100351	The DNA methylation landscape of glioblastoma disease progression shows extensive heterogeneity in time and space	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	579	TXT RPKM BED	Christoph Bock	Jun 20, 2018
GSE116862	Chromatin structure dynamics during human cardiomyocyte differention reveals a role of HERV-H in demarcating TAD boundaries.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Callithrix jacchus Homo sapiens Pan paniscus Pan troglodytes	115	TXT RPKM HIC BW SRA Run Selector	Bing Ren	Jul 09, 2019
GSE162739	BAP1 activity regulates Polycomb occupancy and global chromatin condensation counteracting diffuse PCGF3/5-dependent H2AK119ub1 deposition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	192	TXT TSV RPKM BED SRA Run Selector	Federico Rossi	Jun 27, 2021
GSE186958	Chromatin structure dynamics during human cardiomyocyte differention	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Callithrix jacchus Homo sapiens Pan paniscus Pan troglodytes	115	TXT RPKM HIC BW	Bing Ren	Nov 01, 2021
GSE229729	Decoding the Universal Human Chromatin Landscape through Teratoma-Based Profiling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	TSV TBI RPKM MTX H5 BEDGRAPH	Benjamin L Kidder	Jan 29, 2024
GSE23316	ENCODE Caltech RNA-seq	Expression profiling by high throughput sequencing	Homo sapiens	36	SRA Run Selector RPKM PSL FASTA BOWTIE BEDGRAPH BED12	ENCODE DCC	Jul 30, 2010
GSE31653	Ultra short and progressive 4sU-tagging reveals key characteristics of RNA processing at nucleotide resolution	Expression profiling by high throughput sequencing	Homo sapiens	7	SRA Run Selector RPKM	Caroline Friedel	Apr 26, 2012
GSE32307	Transposon-based construction of strand-specific RNA-seq libraries	Expression profiling by high throughput sequencing	Homo sapiens	15	SRA Run Selector RPKM	Jason Gertz	Oct 10, 2011
GSE39537	Mapping Epigenomic Type-Specific Differences Occurring During Hematopoiesis [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	1	SRA Run Selector RPKM BED	Brian J Abraham	Mar 25, 2013
GSE41716	Somatic copy-number mosaicism in human skin revealed by induced pluripotent stem cells (sequencing)	Expression profiling by high throughput sequencing	Homo sapiens	29	SRA Run Selector RPKM	Flora Vaccarino	Oct 31, 2012
GSE43986	The Estrogen receptor alpha regulated NEAT1 long non-coding RNA promotes prostate cancer progression [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	4	SRA Run Selector RPKM CSV	Dimple Chakravarty	Dec 01, 2014
GSE43988	The Estrogen receptor alpha regulated NEAT1 long non-coding RNA promotes prostate cancer progression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	9	RPKM CSV BED	Dimple Chakravarty	Dec 01, 2014