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1824 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		NARROWPEAK
GSE62742	Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	249	BEDPE BIGWIG NARROWPEAK TXT SRA Run Selector	Fabian Grubert	Aug 20, 2015
GSE98509	MYOD Remodeling of the Genome Architecture during Myogenic Conversion of Somatic Cells	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	16	BED BW CSV NARROWPEAK TXT SRA Run Selector	Alessandra Dall'Agnese	Sep 10, 2019
GSE115317	Coronary artery disease genes SMAD3 and TCF21 promote opposing interactive genetic programs that regulate smooth muscle cell differentiation and disease risk [ChIP-seq]	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BW NARROWPEAK SRA Run Selector	Thomas Quertermous	Sep 11, 2018
GSE115319	Coronary artery disease genes SMAD3 and TCF21 promote opposing interactive genetic programs that regulate smooth muscle cell differentiation and disease risk	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	8	BW NARROWPEAK	Thomas Quertermous	Sep 11, 2018
GSE115438	Positional specificity of different transcription factor classes within enhancers	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	GAPPEDPEAK NARROWPEAK SRA Run Selector	Sharon R Grossman	Jun 07, 2018
GSE144900	Targeted reprogramming of H3K27me3 resets epigenetic memory in plant paternal chromatin [sperm - third party reanalysis]	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Homo sapiens		BROADPEAK BW NARROWPEAK	Michael Borg	Mar 17, 2020
GSE185128	EWS/FLI mediated reprogramming of 3D chromatin promotes an altered transcriptional state in Ewing sarcoma (Cut&Tag III)	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BED BW NARROWPEAK TXT	Iftekhar Ahmed Showpnil	Aug 15, 2022
GSE188559	Shared patterns of glial transcriptional dysregulation link Huntington's disease and schizophrenia	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	2	BW NARROWPEAK TXT SRA Run Selector	Steven Goldman	May 08, 2024
GSE188561	Shared patterns of glial transcriptional dysregulation link Huntington's disease and schizophrenia	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	139	BW NARROWPEAK	Steven Goldman	May 08, 2024
GSE215022	Targeting DCAF5 suppresses SMARCB1-mutant cancer via stabilizing SWI/SNF	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BW NARROWPEAK	Jacquelyn A Myers	Mar 22, 2024
GSE231492	Dimeric G-quadruplex motifs-induced NFRs determine strong replication origins in vertebrates	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus Homo sapiens Mus musculus	14	BED BIGWIG NARROWPEAK	Caroline Tonnerre-Doncarli	Jul 19, 2023
GSE247171	Deterioration of multi-level 3D genome organization during breast cancer progression [third-party re-analysis]	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BIGWIG BROADPEAK NARROWPEAK TXT	Roberto Rossini	Aug 06, 2024
GSE256261	Reanalysis of white and brite adipocyte ChIP-Seq of PPARG and MED1 in the hg38 genome	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BROADPEAK BW NARROWPEAK	Philippe Collas	May 14, 2024
GSE256262	Alternative isoform expression of key thermogenic genes in human beige adipocytes	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	46	BROADPEAK BW NARROWPEAK	Philippe Collas	May 14, 2024
GSE148396	Epstein-Barr virus nuclear antigen 2 (EBNA2) extensively rewires the human chromatin landscape at autoimmune risk loci	SNP genotyping by SNP array Other Genome variation profiling by SNP array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	29	BIM BW HIC IDAT NARROWPEAK TSV TXT	Matthew Weirauch	Sep 23, 2021
GSE51334	DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions	Other	Homo sapiens Mus musculus	993	BAM BED BIGWIG BROADPEAK NARROWPEAK PAIR TSV TXT	ENCODE DCC	Nov 20, 2014
GSE51341	Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence	Other	Homo sapiens Mus musculus	32	BAM BED BIGWIG BROADPEAK NARROWPEAK TXT WIG	ENCODE DCC	Nov 19, 2014
GSE67633	Epigenetic determinants of self-renewal in glioblastoma [ATAC-seq]	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	NARROWPEAK SRA Run Selector	Alexander James Murison	Dec 08, 2015
GSE75356	A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Danio rerio Homo sapiens	48	BW NARROWPEAK	Leonard Zon	Feb 01, 2016
GSE76418	lncRNA DINO ChIRPseq in DNA damaged U2OS cells	Other	Homo sapiens	6	NARROWPEAK SRA Run Selector	Adam Schmitt	Sep 26, 2016