Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
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GSE147123 |
Structural variants drive context dependent oncogene activation in cancer
|
164 |
|
Jesse R Dixon | Oct 04, 2022 | |||
GSE217189 |
scNanoHi-C: a single-cell long-read concatemer sequencing method to reveal high-order structures within individual cells
|
|
16 | Jiansen Lu | Jul 14, 2023 | |||
GSE186599 |
TULIPs decorate the three-dimensional genome of PFA ependymoma
|
160 | Marco Gallo | Jul 05, 2024 | ||||
GSE138543 |
Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells
|
22 |
|
Mikhail Magnitov | Mar 22, 2021 | |||
GSE148079 |
Subtype-associated epigenomic landscape and 3D genome structure in bladder cancer
|
51 |
|
Feng Yue | Jan 04, 2021 | |||
GSE152136 |
Subtype-Specific and Structure Variation-Induced Chromatin Spatial Reorganization in Acute Myeloid Leukemia
|
135 | Feng Yue | Jul 19, 2022 | ||||
GSE155971 |
MCM complexes are barriers that restrict loops and TADs
|
22 |
|
Ilya M. Flyamer | Mar 07, 2022 | |||
GSE163666 |
Systematic evaluation of chromosome conformation capture assays
|
118 | Job Dekker | Mar 08, 2021 | ||||
GSE165894 |
Systematic evaluation of chromosome conformation capture assays [Hi-C]
|
96 |
|
Job Dekker | Mar 08, 2021 | |||
GSE168233 |
SETDB1 Fuels the Lung Cancer Phenotype by Modulating Epigenome, 3D Genome Organization, and Chromatin Mechanical Properties
|
40 |
|
Mikhail Magnitov | Mar 29, 2022 | |||
GSE182105 |
Heterochromatin diversity modulates genome compartmentalization and loop extrusion barriers [HiC]
|
9 |
|
George Spracklin | Jul 01, 2022 | |||
GSE198610 |
Mitotic chromosomes are self-entangled and disentangle through a Topoisomerase II-dependent two stage exit from mitosis
|
137 |
|
Job Dekker | Mar 07, 2024 | |||
GSE206131 |
RNA polymerase II and PARP1 shape enhancer-promoter contacts [Micro-C]
|
|
51 |
|
Charles Grahe Danko | Jun 18, 2022 | ||
GSE229681 |
Stage-specific dynamic reorganization of genome topology shapes transcriptional neighborhoods in developing human retinal organoids
|
5 | Zachary A Batz | Nov 03, 2023 | ||||
GSE229683 |
Stage-specific dynamic reorganization of genome topology shapes transcriptional neighborhoods in developing human retinal organoids
|
20 | Zachary A Batz | Nov 03, 2023 | ||||
GSE229966 |
Extreme structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs
|
74 | Argyris Papantonis | Mar 18, 2024 | ||||
GSE238256 |
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor
|
51 | Argyris Papantonis | Apr 24, 2024 | ||||
GSE246947 |
Deterioration of multi-level 3D genome organization during breast cancer progression
|
6 | Roberto Rossini | Aug 06, 2024 | ||||
GSE266750 |
GATA6 is a Novel Regulator of Gene Expression and 3D Genome in Colorectal Cancer
|
|
75 | Feng Yue | Dec 19, 2024 | |||
GSE277721 |
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
|
142 |
|
Jesse R Dixon | Oct 07, 2024 |