83 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE147123
Structural variants drive context dependent oncogene activation in cancer
  • Link icon Homo sapiens
164 Jesse R Dixon Oct 04, 2022
GSE217189
scNanoHi-C: a single-cell long-read concatemer sequencing method to reveal high-order structures within individual cells
16 Jiansen Lu Jul 14, 2023
GSE186599
TULIPs decorate the three-dimensional genome of PFA ependymoma
  • Link icon Homo sapiens
160 Marco Gallo Jul 05, 2024
GSE138543
Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells
  • Link icon Homo sapiens
22 Mikhail Magnitov Mar 22, 2021
GSE148079
Subtype-associated epigenomic landscape and 3D genome structure in bladder cancer
  • Link icon Homo sapiens
51 Feng Yue Jan 04, 2021
GSE152136
Subtype-Specific and Structure Variation-Induced Chromatin Spatial Reorganization in Acute Myeloid Leukemia
  • Link icon Homo sapiens
135 Feng Yue Jul 19, 2022
GSE155971
MCM complexes are barriers that restrict loops and TADs
  • Link icon Homo sapiens
22 Ilya M. Flyamer Mar 07, 2022
GSE163666
Systematic evaluation of chromosome conformation capture assays
  • Link icon Homo sapiens
118 Job Dekker Mar 08, 2021
GSE165894
Systematic evaluation of chromosome conformation capture assays [Hi-C]
  • Link icon Homo sapiens
96 Job Dekker Mar 08, 2021
GSE168233
SETDB1 Fuels the Lung Cancer Phenotype by Modulating Epigenome, 3D Genome Organization, and Chromatin Mechanical Properties
  • Link icon Homo sapiens
40 Mikhail Magnitov Mar 29, 2022
GSE182105
Heterochromatin diversity modulates genome compartmentalization and loop extrusion barriers [HiC]
  • Link icon Homo sapiens
9 George Spracklin Jul 01, 2022
GSE198610
Mitotic chromosomes are self-entangled and disentangle through a Topoisomerase II-dependent two stage exit from mitosis
  • Link icon Homo sapiens
137 Job Dekker Mar 07, 2024
GSE206131
RNA polymerase II and PARP1 shape enhancer-promoter contacts [Micro-C]
51 Charles Grahe Danko Jun 18, 2022
GSE229681
Stage-specific dynamic reorganization of genome topology shapes transcriptional neighborhoods in developing human retinal organoids
  • Link icon Homo sapiens
5 Zachary A Batz Nov 03, 2023
GSE229683
Stage-specific dynamic reorganization of genome topology shapes transcriptional neighborhoods in developing human retinal organoids
  • Link icon Homo sapiens
20 Zachary A Batz Nov 03, 2023
GSE229966
Extreme structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs
  • Link icon Homo sapiens
74 Argyris Papantonis Mar 18, 2024
GSE238256
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor
  • Link icon Homo sapiens
51 Argyris Papantonis Apr 24, 2024
GSE246947
Deterioration of multi-level 3D genome organization during breast cancer progression
  • Link icon Homo sapiens
6 Roberto Rossini Aug 06, 2024
GSE266750
GATA6 is a Novel Regulator of Gene Expression and 3D Genome in Colorectal Cancer
75 Feng Yue Dec 19, 2024
GSE277721
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
  • Link icon Homo sapiens
142 Jesse R Dixon Oct 07, 2024