GEO Browser - GEO

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433 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		BROADPEAK
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1134	BROADPEAK BW CEL MTX TSV XLS ZIP	Antoni Berenguer-LLergo	Nov 16, 2021
GSE51334	DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions	Other	Homo sapiens Mus musculus	993	BAM BED BIGWIG BROADPEAK NARROWPEAK PAIR TSV TXT	ENCODE DCC	Nov 20, 2014
GSE230932	Comprehensive multi-mark and multi-omic profiling reveals epigenetic and transcriptional reprogramming in lung tumors	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	442	BROADPEAK BW NARROWPEAK TXT	Chang Lu	May 31, 2024
GSE32465	Transcription Factor Binding Sites by ChIP-seq from ENCODE/HAIB	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	399	BIGWIG BROADPEAK TXT SRA Run Selector	ENCODE DCC	Sep 29, 2011
GSE104988	KDM5B links cellular transcriptome heterogeneity to therapy resistance	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	333	BED BROADPEAK BW NARROWPEAK TSV TXT	Kornelia Polyak	Oct 03, 2018
GSE29611	Histone Modifications by ChIP-seq from ENCODE/Broad Institute	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	296	BAM BIGWIG BROADPEAK TXT SRA Run Selector	ENCODE DCC	Jun 02, 2011
GSE241347	Chromatin-associated LTR RNA m5C oxidation by TET2 regulates leukemogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	291	BED BIGWIG BROADPEAK NARROWPEAK TXT	Xiaoyang Dou	Jul 24, 2024
GSE51336	Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	266	BAM BED BIGWIG BROADPEAK NARROWPEAK WIG	ENCODE DCC	Nov 20, 2014
GSE142332	Epigenomic Tensor Predicts Disease Subtypes and Reveals Constrained Tumor Evolution	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	262	BROADPEAK NARROWPEAK TSV	Jun S Song	Mar 30, 2021
GSE176493	Comprehensive target engagement by EZH2 inhibitor CPI-0209 allows for preferential targeting of ARID1A mutant urothelial carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	252	BED BROADPEAK BW NARROWPEAK RESULTS TXT	Patrick Trojer	Jun 26, 2024
GSE212357	Stepwise activities of mSWI/SNF family chromatin remodeling complexes direct T cell activation and exhaustion	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	228	BROADPEAK BW NARROWPEAK TXT	Cigall Kadoch	Mar 21, 2023
GSE112658	Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	213	BED BROADPEAK NARROWPEAK TSV	Gary S Firestein	Apr 30, 2018
GSE29692	DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	208	BAM BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	ENCODE DCC	Jun 03, 2011
GSE142328	Epigenomic Tensor Predicts Disease Subtypes and Reveals Constrained Tumor Evolution	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	196	BROADPEAK TXT SRA Run Selector	Jun S Song	Mar 30, 2021
GSE19090	Exon arrays of ENCODE tier 1, tier 2 and tier 3 cell types	Expression profiling by array	Homo sapiens	182	BED BROADPEAK CEL	ENCODE DCC	Nov 19, 2009
GSE30263	CTCF Binding Sites by ChIP-seq from ENCODE/University of Washington	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	174	BAM BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	ENCODE DCC	Jun 29, 2011
GSE133183	H3K27me3-rich genomic regions can function as silencers to repress gene expression via chromatin interactions	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	173	BROADPEAK NARROWPEAK TSV TXT SRA Run Selector	Melissa Fullwood	Dec 01, 2020
GSE35583	Histone Modifications by ChIP-seq from ENCODE/University of Washington	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	171	BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	ENCODE DCC	Jun 07, 2012
GSE104983	KDM5B links cellular transcriptome heterogeneity to therapy resistance (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	171	BED BROADPEAK BW NARROWPEAK SRA Run Selector	Kornelia Polyak	Oct 03, 2018
GSE232916	IL-15-DEPENDENT IMMUNE CROSS-TALK BETWEEN NK CELLS AND DENDRITIC CELLS IN HIV-1 ELITE CONTROLLERS	Expression profiling by high throughput sequencing Other	Homo sapiens	169	BROADPEAK	Ce Gao	Dec 05, 2023