GEO Browser - GEO

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153 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247		Homo sapiens		BW
GSE197608	Short C-terminal Musashi-1 proteins regulate pluripotency states in embryonic stem cells	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	24	XLSX TXT BW BEDGRAPH	Gufa Lin	Nov 05, 2023
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	XLSX COOL BW BIGWIG BEDGRAPH BED	Mariam Okhovat	Oct 20, 2023
GSE198517	Inhibition of SWI/SNF broadly disrupts enhancers and reveals remodeler redundancy at promoters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	107	XLSX TSV BW	Karen Adelman	Nov 02, 2023
GSE207163	Transcriptional repression by a secondary DNA binding surface of DNA topoisomerase I safeguards against hypertranscription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	62	XLSX TXT RESULTS BW BED	Zhenhua hu	May 29, 2023
GSE215086	Knocking out BATF improves CAR-T cell efficacy by resisting exhaustion and forming central memory cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	40	XLSX BW	Xingying Zhang	Oct 12, 2022
GSE242724	Base-resolution m5C profiling across the mammalian transcriptome by bisulfite-free enzyme-assisted chemical labeling approach	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	104	XLS TXT CSV BW	Xiaoyu Li	Jul 11, 2024
GSE200580	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	WIG BW	Luke Thomas Isbel	Apr 30, 2023
GSE200586	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	174	WIG BW	Luke Thomas Isbel	Apr 29, 2023
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	TXT TSV MTX BW BED	Beisi Xu	May 03, 2017
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	47	TXT TSV MTX BW SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020
GSE138191	Genome-wide chromatin analyses and RNA-seq of liver cells upon YAP induction	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	83	TXT BW BED	stefano campaner	Jul 25, 2022
GSE151426	Temporal evolution of cellular heterogeneity during the progression to advanced, AR-negative prostate cancer	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	53	TXT H5 BW	Nicholas Brady	Apr 07, 2021
GSE153651	m6A directs the demethylation of histone H3K9me2 co-transcriptionall	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	TXT BW BED SRA Run Selector	linjian xia	Jul 01, 2020
GSE154063	Transcriptome profile of ENDOC-BH1 cells and isolated murine islets modulating TFEB expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	74	TXT BW	Rossella De Cegli	Jul 31, 2023
GSE158435	Single-cell joint detection of chromatin occupancy and transcriptome enables higher-dimensional epigenomic reconstructions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16491	TXT BW BED SRA Run Selector	Haiqing Xiong	Mar 05, 2021
GSE169658	JAZF1-SUZ12 dysregulates PRC2 recruitment and gene expression during cell differentiation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	116	TXT BW SRA Run Selector	Maria Vila de Mucha	Apr 25, 2022
GSE171758	Profiling histone modifications in clinical archived formalin fixed paraffin embedded samples	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	60	TXT BW SRA Run Selector	xingqi chen	Sep 03, 2021
GSE175803	m6Am RNA methyltransferases PCIF1 regulate tumorigenesis of colorectal cancer and its immune responses to anti-PD-1 therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	TXT TSV CSV BW SRA Run Selector	Lingling Wang	Nov 12, 2022
GSE180175	Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	136	TXT BW BEDPE SRA Run Selector	Yaqiang Cao	Oct 02, 2022
GSE181499	ZNF384 fusion oncoproteins drive lineage aberrancy in acute leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	81	TXT TSV NARROWPEAK MTX BW	QINGSONG GAO	Aug 31, 2022