GEO Browser - GEO

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153 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057		Homo sapiens		BW
GSE142238	Cross-species analysis of melanoma enhancer logic using deep learning	Genome binding/occupancy profiling by high throughput sequencing	Canis lupus familiaris Danio rerio Equus caballus Homo sapiens Mus musculus Sus scrofa domesticus	23	BW SRA Run Selector	Stein Aerts	Apr 22, 2020
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Capsaspora owczarzaki Homo sapiens Mus musculus Nematostella vectensis Neurospora crassa Oryza sativa	40	BIGWIG BW TXT SRA Run Selector	Christopher Benner	Sep 16, 2019
GSE131334	Oncogenic CDK13 Mutations Impede Nuclear RNA Surveillance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	87	BW TXT	Richard A Young	Apr 21, 2023
GSE101646	A cryptic Tudor domain links BRWD2/PHIP to COMPASS-mediated histone H3K4 methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	84	BW SRA Run Selector	Ali Shilatifard	Nov 02, 2017
GSE127121	Variant PRC2.1 and PRC2.2 co-operate to direct H3K27 methylations in ESCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	79	BW	Darren John Fitzpatrick	Sep 11, 2019
GSE185927	Distinct roles for CDK-Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	81	BW SRA Run Selector	Emilia Dimitrova	May 23, 2022
GSE199801	A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_ChIPseq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	60	BED BW CSV	Emilia Dimitrova	Dec 22, 2022
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gorilla gorilla Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE59176	Prevalent p53 gain-of-function mutants co-opt epigenetic pathways to drive cancer growth	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	15	BEDGRAPH BW TXT SRA Run Selector	Morgan Sammons	Jul 31, 2015
GSE69143	7SK-BAF axis controls pervasive transcription at enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	74	BW	Ryan Alexander Flynn	Feb 01, 2016
GSE77205	Cell-type dependent enhancer binding of the EWS/ATF1 fusion gene in clear cell sarcomas	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	35	BW CEL	Yasuhiro Yamada	Jul 18, 2019
GSE78688	Activity-dependent transcriptional changes in human neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	43	BW SRA Run Selector	Bulent Ataman	Nov 02, 2016
GSE85337	Natural Selection has Shaped Coding and Non-coding Transcription in Primate CD4+ T-cells	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes Rattus norvegicus	24	BW SRA Run Selector	Charles G Danko	Dec 29, 2016
GSE95374	Selective silencing of euchromatic L1s revealed by genome-wide screens for L1 regulators	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	104	BW TXT SRA Run Selector	Nian Liu	Dec 06, 2017
GSE96676	COX-2 mediates tumor-stromal Prolactin signaling to initiate tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	164	BW	Ben S. Wittner	Feb 25, 2019
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE100647	Che-1/AATF sustains cell growth and global transcription in Multiple Myeloma through the maintenance of open chromatin structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BIGWIG BW	Matteo Pallocca	Jun 07, 2021
GSE107957	Hematopoietic stem cell expansion through suppression of YTHDF2-mediated m6A-marked mRNA decay	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BW	Madelaine Gogol	Aug 17, 2018
GSE111003	Transcriptomes and Epigenomes of Hemin exposed trained monocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	94	BW TXT	Cristian Ruiz-Moreno	Feb 21, 2020
GSE111009	Cell type-dependent control of enhancer and p53 transcriptional activity by p63	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	98	BED BEDGRAPH BW NARROWPEAK TXT SRA Run Selector	Morgan A Sammons	Feb 11, 2019