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77 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417		Homo sapiens
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE45157	Trans-chromosomal regulation by a novel lincRNA required for adipogenesis that escapes X-chromosome inactivation	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	21	TAB TXT SRA Run Selector	Loyal A Goff	Jun 01, 2013
GSE65525	Droplet barcoding for single cell transcriptomics applied to embryonic stem cells	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	8	CSV SRA Run Selector	Allon M Klein	May 20, 2015
GSE66092	PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage.	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	32	BED BEDGRAPH TXT SRA Run Selector	Hun-Way Hwang	Feb 19, 2016
GSE66230	Subcellular whole transcriptome profiling reveals the RNA composition of motor axons	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	43	CSV SRA Run Selector	Silke Appenzeller	Oct 13, 2015
GSE69186	Small and large RNA sequencing of mouse livers receiving small hairpin RNAs	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	107	TXT SRA Run Selector	Paul Valdmanis	Mar 09, 2016
GSE70181	Comparison of Hi-C results using in-solution versus in-nucleus ligation	Other	Homo sapiens Mus musculus	13	TXT SRA Run Selector	Steven William Wingett	Aug 12, 2015
GSE71154	m6A-CLIP identified major presence of m6A in last exons	Other	Homo sapiens Mus musculus	8	BED BEDGRAPH TXT SRA Run Selector	Shengdong Ke	Sep 28, 2015
GSE73059	miRNA-target chimeras identified with CLEAR-CLIP reveal miRNA 3' end pairing as a major determinant of Argonaute binding in vivo	Other	Homo sapiens Mus musculus	57		Michael John Moore	Nov 15, 2015
GSE77553	Capturing pairwise and multi-way chromosomal conformations using C-walks	Other	Homo sapiens Mus musculus	20	TXT SRA Run Selector	Pedro Olivares-Chauvet	Feb 04, 2016
GSE77788	Phosphatidylinositol 3-Kinase (PI3K) delta blockade increases genomic instability in B cells	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	162	BED TXT SRA Run Selector	Roberto Chiarle	Jan 31, 2017
GSE80105	Synergistic model of chromatin predicts Dnase-I accessibility	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TAR TSV TXT SRA Run Selector	David Gifford	Jul 20, 2016
GSE81255	Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	BED BROADPEAK BW CSV SRA Run Selector	William Greenleaf	May 10, 2016
GSE81258	Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	91		William Greenleaf	May 10, 2016
GSE84968	Histone H2A T120 phophorylation promotes oncogenic transformation via upregulation of cyclin D1y	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	20	IDAT TXT	TAKEYA NAKAGAWA	Oct 07, 2016
GSE86227	HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons [hnRNPA2B1_small_rnaseq]	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	12	CSV SRA Run Selector	Gene Yeo	Oct 20, 2016
GSE86464	HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons	Expression profiling by array Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	124	BED BW CEL CSV	Gene Yeo	Oct 20, 2016
GSE87749	An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	56		Lars Roed Ingerslev	Feb 22, 2017
GSE89371	A genome-wide CRISPR activation screen identifies B4GALNT2 as an inhibitory host factor for influenza virus infection	Other	Homo sapiens Mus musculus	9	TXT SRA Run Selector	Nicholas Heaton	Jul 17, 2017
GSE93848	High-throughput manual-quality annotation of full-length long noncoding RNAs with Capture Long-Read Sequencing (CLS)	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	36	SRA Run Selector	Julien Lagarde	Jan 20, 2017