GEO Browser - GEO

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1151 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Drosophila melanogaster		BED
GSE228170	4C-Seq Drosophila Imaginal Disc HP6/Umbrea	Other	Drosophila melanogaster	1	BED	UnJin Lee	Jul 16, 2024
GSE118013	4C-seq characterization of Drosophila BEAF binding regions provides evidence for highly variable long-distance interactions between active chromatin	Other	Drosophila melanogaster	8	BED SRA Run Selector	Craig M. Hart	Aug 02, 2018
GSE86795	6mA-DNA-binding factor Jumu controls maternal-to-zygotic transition upstream of Zelda	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	40	BED TXT SRA Run Selector	Shunmin He	Apr 18, 2019
GSE199801	A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_ChIPseq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	60	BED BW CSV	Emilia Dimitrova	Dec 22, 2022
GSE59924	A Novel Role of Polycomb in Positive Transcription Regulation by Modulating H4K20me1	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	4	BED BW TXT SRA Run Selector	Gang Wei	Apr 12, 2016
GSE124785	A chemical genetic method for monitoring genome-wide dynamics of O-GlcNAc turnover on chromatin-associated proteins.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	38	BED BEDGRAPH SRA Run Selector	David Vocadlo	Jan 07, 2020
GSE38727	A common set of DNA regulatory elements shapes Drosophila appendages	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	22	BED TXT WIG XLS SRA Run Selector	Daniel J McKay	Nov 07, 2013
GSE272579	A developmental mechanism to Regulate Alternative Polyadenylation in an Adult Stem Cell Lineage [3'seq_KDs]	Expression profiling by high throughput sequencing	Drosophila melanogaster	18	BED TXT	Lorenzo Gallicchio	Jul 22, 2024
GSE272580	A developmental mechanism to Regulate Alternative Polyadenylation in an Adult Stem Cell Lineage [3'seq_OEs]	Expression profiling by high throughput sequencing	Drosophila melanogaster	8	BED TXT	Lorenzo Gallicchio	Jul 22, 2024
GSE46009	A genome-wide RNAi screen draws a genetic framework for transposon control and primary piRNA biogenesis in Drosophila	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	37	BED TXT SRA Run Selector	Felix Muerdter	May 09, 2013
GSE193224	A giant virus genome is densely packaged by stable nucleosomes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Marseillevirus marseillevirus synthetic construct	117	BED BEDGRAPH BIGWIG FASTA PDF	Jorja Henikoff	Sep 27, 2022
GSE41703	A global change in RNA Polymerase II pausing during the Drosophila midblastula transition	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	26	BED	Julia Zeitlinger	Jul 25, 2013
GSE41700	A global change in RNA Polymerase II pausing during the Drosophila midblastula transition [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	25	BED SRA Run Selector	Julia Zeitlinger	Jul 26, 2013
GSE41686	A global change in RNA Polymerase II pausing during the Drosophila midblastula transition [MNase-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	1	BED SRA Run Selector	Julia Zeitlinger	Jul 26, 2013
GSE87792	A mutually exclusive stem loop arrangement in roX2 RNA is essential for X chromosome regulation in Drosophila	Expression profiling by high throughput sequencing	Drosophila melanogaster	12	BED BIGWIG BW GFF NARROWPEAK SRA Run Selector	Asifa Akhtar	Oct 01, 2017
GSE67454	A simple method for generating high-resolution maps of genome wide protein binding	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	5	BED WIG SRA Run Selector	Jorja Henikoff	Jun 12, 2015
GSE59192	A strand-specific switch in noncoding transcription switches the function of a Polycomb/Trithorax response element	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	BED SRA Run Selector	Leonie Ringrose	Aug 10, 2014
GSE60215	A streamline experimental and computational approach for inexpensive, accurate, efficient and high-throughput annotation of 5’ and 3’ ends	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	54	BED TDF TXT WIG SRA Run Selector	Shaked Afik	Feb 13, 2017
GSE85407	ACF1 regulates nucleosome spacing in Drosophila euchromatin	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	20	BED BEDGRAPH	Tobias Straub	Jan 01, 2018
GSE85404	ACF1 regulates nucleosome spacing in Drosophila euchromatin [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BED BEDGRAPH SRA Run Selector	Tobias Straub	Jan 01, 2018