GEO Browser - GEO

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372 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Plasmodium falciparum
GSE54806	3D7 PfHda2 Knockdown vs. Wildtype	Expression profiling by array	Plasmodium falciparum Plasmodium falciparum 3D7	22	TXT	Manuel Llinas	Feb 11, 2014
GSE47611	4PEHz-treated P.falciparum parasites vs. untreated extracted at timepoints t1 (12 Hours post invasion or HPI), t2 (24 HPI) and t3 (36 HPI)	Expression profiling by array	Plasmodium falciparum	14	GPR	Shaun Reeksting	Feb 28, 2014
GSE159127	5-methylcytosine modification-mediated mRNA stabilization is associated with sexual development of malaria parasites	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Plasmodium falciparum Plasmodium yoelii	36	XLS	meng liu	Feb 07, 2022
GSE159126	5-methylcytosine modification-mediated mRNA stabilization is associated with sexual development of malaria parasites [BisRNA-seq]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Plasmodium falciparum Plasmodium yoelii	14	TXT XLSX SRA Run Selector	meng liu	Feb 08, 2022
GSE159124	5-methylcytosine modification-mediated mRNA stabilization is associated with sexual development of malaria parasites [RNA-seq]	Expression profiling by high throughput sequencing	Plasmodium falciparum Plasmodium yoelii	14	TXT SRA Run Selector	meng liu	Feb 08, 2022
GSE103036	5CAPture-seq: a method for enriching full-length cDNA and identifying 5′ capped nucleotides	Expression profiling by high throughput sequencing	Plasmodium falciparum	24	TXT SRA Run Selector	Pavita Kaewprommal	Aug 02, 2021
GSE91188	A High Parasite Density Environment Induces Transcriptional Changes and Cell Death in Plasmodium falciparum Blood Stages	Expression profiling by array	Anopheles gambiae Plasmodium falciparum	9	CEL CSV	Karen Day	Dec 31, 2017
GSE7149	A Microarray-based Analysis of Transcriptional Compartmentalization in the Alimentary Canal of Anopheles gambiae	Expression profiling by array	Anopheles gambiae Plasmodium falciparum	15	CEL	Marco V. Neira	Oct 01, 2007
GSE64691	A Novel Plasmodium Falciparum Bromodomain Protein Regulates Invasion Gene Expression	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum Plasmodium falciparum 3D7	66	GPR	Michaela Petter	Jan 07, 2015
GSE151557	A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood stage samples	Expression profiling by high throughput sequencing	Plasmodium falciparum	22	TXT SRA Run Selector	Zbynek Bozdech	Jun 02, 2020
GSE151754	A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples.	Expression profiling by array	Plasmodium falciparum	28	GPR	Zbynek Bozdech	Oct 20, 2020
GSE63369	A comprehensive epigenome map of Plasmodium falciparum reveals unique mechanisms of transcriptional regulation	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	39	BED SRA Run Selector	Krishanpal Karmodiya	Sep 23, 2015
GSE184659	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	192	BED BW	Mei Jiang	Mar 06, 2022
GSE184658	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	144	BED BW SRA Run Selector	Mei Jiang	Mar 06, 2022
GSE184645	A coordinated regulatory network of ApiAP2 transcription factors involved in heterochromatic gene expression during Plasmodium falciparum blood-stage development [RNA-Seq]	Expression profiling by high throughput sequencing	Plasmodium falciparum	48	CSV SRA Run Selector	Mei Jiang	Mar 06, 2022
GSE75295	A crucial role of the zinc finger protein PfZnFP-G in sexual differentiation of the malaria parasites, Plasmodium falciparum	Expression profiling by array Genome binding/occupancy profiling by array	Plasmodium falciparum	30	GPR TXT	Yen-Hoon Luah	Nov 24, 2015
GSE33002	A major genome region underlying artemisinin resistance in malaria	Genome variation profiling by genome tiling array	Plasmodium falciparum	167	BASES	Michael Ferdig	May 01, 2012
GSE136169	A mevalonate bypass system facilitates elucidation of apicoplast biology in malaria parasites	Expression profiling by array	Plasmodium falciparum	53	TXT	Anne E. Jedlicka	Feb 11, 2020
GSE54253	A new Agilent 15K cross strain P. falciparum microarray optimized for the transcriptome analysis of Indian P. falciparum isolates	Expression profiling by array	Plasmodium falciparum	13	TXT	Ashis Kumar Das	Jan 17, 2016
GSE223497	A novel Modulator of Ring Stage Translation (MRST) gene alters artemisinin sensitivity in Plasmodium falciparum	Expression profiling by high throughput sequencing	Plasmodium falciparum	20	XLSX	Caroline Simmons	May 12, 2023