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6006 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Arabidopsis thaliana
GSE150422	Dissecting the co-transcriptome landscape of plants and microbiota	Expression profiling by high throughput sequencing	Acinetobacter sp. Leaf130 Arabidopsis thaliana Arthrobacter sp. Soil763 Burkholderia sp. Leaf177 Chryseobacterium sp. Leaf404 Exiguobacterium sp. Leaf187 Flavobacterium sp. Root935 Pedobacter sp. Leaf176 Plantibacter sp. Leaf1 Rhizobium sp. Leaf155	125	FNA TXT SRA Run Selector	Tatsuya Nobori	Apr 26, 2021
GSE148670	Transcriptome of Moesziomyces albugensis in response to different biotic factors (A. laibachii & SynCom) on A. thaliana leaves	Expression profiling by high throughput sequencing	Albugo laibachii Arabidopsis thaliana Moesziomyces sp. GD-2020a	15	TXT SRA Run Selector	Gunther Doehlemann	Jan 15, 2021
GSE24389	Analysis of the Aloe vera transcriptome using the Affymetrix ATH1 GenChip	Expression profiling by array	Aloe vera Arabidopsis thaliana	7	CEL	Nottingham Arabidopsis Stock Centre (NASC)	Mar 27, 2011
GSE35606	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells (miRNA)	Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	4	GPR	Janet M. Young	Apr 02, 2012
GSE35921	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells	Expression profiling by array Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	16	GPR	Janet M. Young	Apr 02, 2012
GSE40621	CINCINNATA Controls Surface Curvature of Antirrhinum Leaf by Coordinated and Direct Activation of Cytokinin and Auxin Signaling	Expression profiling by array	Antirrhinum majus Arabidopsis thaliana	10	TXT	Mainak Das Gupta	May 01, 2013
GSE21152	Conservation and divergence of methylation patterning in plants and animals	Methylation profiling by high throughput sequencing	Apis mellifera Arabidopsis thaliana Chlamydomonas reinhardtii Ciona intestinalis Danio rerio Mus musculus Oryza sativa Populus trichocarpa	14	TXT SRA Run Selector	matteo Pellegrini	Apr 09, 2010
GSE21762	Microarray analysis of cross-talks between Jasmonate acid and ethylene signaling in Arabidopsis seedlings	Expression profiling by array	Arabidopsis Arabidopsis thaliana	12	CEL CHP	Hongwei Guo	May 11, 2010
GSE23940	apum23_col3	Expression profiling by array	Arabidopsis Arabidopsis thaliana	6	CEL	Yeon-Ki Kim	Mar 01, 2011
GSE26065	Unstable transcripts in Arabidopsis allotetraploids are associated with nonadditive gene expression in response to abiotic and biotic stresses	Expression profiling by array	Arabidopsis Arabidopsis thaliana	8	GPR	Z Jeffrey Jeffrey Chen	Sep 16, 2011
GSE28493	dehydration response: dcp5-1 and WT	Expression profiling by array	Arabidopsis Arabidopsis thaliana	8	TXT	Jun Xu	Apr 06, 2012
GSE40940	Natural variation of transcriptional networks in Arabidopsis thaliana in response to salt stress	Expression profiling by array	Arabidopsis Arabidopsis thaliana	8	TXT	Zhulong Chan	Jan 01, 2014
GSE48474	Dissecting physiological and transcriptional responses of nitric oxide to drought stress by increasing in vivo nitric oxide content in Arabidopsis	Expression profiling by array	Arabidopsis Arabidopsis thaliana	8	CEL	Zhulong Chan	Jun 03, 2014
GSE51859	Regulation of cold-inducible gene expression by RCI1A	Expression profiling by array	Arabidopsis Arabidopsis thaliana	6	GPR TXT	Rafa Catalá	Jan 01, 2015
GSE56146	Arabidopsis Wild-type vs. Gcn2 GT8350 mutant line. Glyphosate-treated	Expression profiling by array	Arabidopsis Arabidopsis thaliana	3	GPR	Jose Gadea	Mar 10, 2015
GSE56147	Arabidopsis Wild-type vs. Gcn2 GT8350 mutant line.	Expression profiling by array	Arabidopsis Arabidopsis thaliana	3	GPR	Jose Gadea	Mar 10, 2015
GSE64070	Development of gene expression signatures for 4 days of waterlogging stress in Arabidopsis thaliana Col-0 plants	Expression profiling by array	Arabidopsis Arabidopsis thaliana	4	TXT	Genotypic technology	Dec 01, 2016
GSE72735	Genome-wide profiling of SWI/SNF chromatin remodeler BRAHMA and Histone H3 lysine demethyalse Relative of Early Flowering 6 (REF6) in Arabidopsis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis Arabidopsis thaliana	27	BED SRA Run Selector	Lei Gao	Mar 28, 2016
GSE118579	Identification of gene expression logical invariants in Arabidopsis	Expression profiling by array Third-party reanalysis	Arabidopsis Arabidopsis halleri Arabidopsis lyrata subsp. petraea Arabidopsis thaliana Brassica napus		TXT	Debashis Sahoo	Oct 31, 2018
GSE147149	Arabidopsis thaliana embryos: wild type vs cuc1 cuc2 double mutant	Expression profiling by array	Arabidopsis Arabidopsis thaliana	2	TXT	Mitsuhiro Aida	Mar 19, 2020