GEO Browser - GEO

Series

Samples

Platforms

DataSets

33 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			synthetic construct		BW
GSE66324	Nitric oxide regulates gene expression in cancers by controlling histone posttranslational modifications	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Non-coding RNA profiling by array	Homo sapiens synthetic construct	22	BED BW CEL	Douglas David Thomas	Nov 05, 2015
GSE81026	Cis Regulatory Element Scan by Tiling-deletion and Sequencing	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens synthetic construct	23	BED BW PDF TAR SRA Run Selector	Bing Ren	Apr 17, 2017
GSE118725	Systematic Analysis of Transcription Factors Binding to Noncoding Variants	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens synthetic construct	11359	BW HIC NARROWPEAK TSV TXT VCF SRA Run Selector	Yunjiang Qiu	Oct 28, 2020
GSE126918	Loss of CHD1 promotes chromatin dysregulation leading to heterogeneous mechanisms of resistance to hormone therapy in prostate cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens synthetic construct	453	BW TXT	Ping Mu	Mar 26, 2020
GSE127890	Native molecule sequencing by nano-ID reveals synthesis and stability of RNA isoforms	Expression profiling by high throughput sequencing	Homo sapiens synthetic construct	22	BW TXT SRA Run Selector	Björn Schwalb	May 06, 2020
GSE130680	DAP-Seq profiling of LHY2 shows night-length information is integrated to determine timing of poplar photoperiodic growth	Other	synthetic construct	4	BW SRA Run Selector	Philip Wigge	Mar 01, 2020
GSE137258	Inhibition of YTHDF2 triggers proteotoxic cell death in MYC-driven breast cancer	Expression profiling by high throughput sequencing Other	Homo sapiens synthetic construct	74	BED BED12 BW TXT SRA Run Selector	Gene Yeo	Jul 02, 2021
GSE138576	The DNA-binding protein HTa from Thermoplasma acidophilum is an archaeal histone analog (Mnase-seq and EMSA-seq)	Genome binding/occupancy profiling by high throughput sequencing Other	Escherichia coli Thermoplasma acidophilum synthetic construct	12	BW SRA Run Selector	Tobias Warnecke	Oct 08, 2019
GSE139417	Functional enhancers shape extrachromosomal oncogene amplifications	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens synthetic construct	20	BED BW TXT	Peter Scacheri	Nov 25, 2019
GSE144454	A genome wide screening for effectors of chromatin accessibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	75	BW	Yusuke Miyanari	May 01, 2022
GSE147504	Targeted DMS probing of SF3A3 5' UTR	Other	Homo sapiens synthetic construct	5	BW SRA Run Selector	Phuong Cao Thi Ngoc	Mar 25, 2021
GSE147506	Key role of dysregulated SF3A3 translation in MYC-induced breast tumorigenesis	Expression profiling by high throughput sequencing Other	Homo sapiens synthetic construct	20	BW	Phuong Cao Thi Ngoc	Mar 25, 2021
GSE152639	Structure of DNA methyltransferases DNMT3A/DNMT3B bound to a nucleosome [seq]	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	synthetic construct	20	BW FA VCF SRA Run Selector	Peter A Jones	Jun 17, 2020
GSE152640	Structure of DNA methyltransferases DNMT3A/DNMT3B bound to a nucleosome	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens synthetic construct	36	BW IDAT VCF	Peter A Jones	Jun 17, 2020
GSE154226	DEtail-seq profiled meiotic DSBs in Saccharomyces cerevisiae	Other	Escherichia coli Saccharomyces cerevisiae synthetic construct	11	BW SRA Run Selector	li kuan	Jan 08, 2023
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus synthetic construct	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE158252	β-Globin Lentiviral Vectors Have Reduced Titers Due to Incomplete Vector RNA Genomes and Lowered Virion Production	Expression profiling by high throughput sequencing	synthetic construct	9	BW FASTA SRA Run Selector	Feiyang Ma	Sep 21, 2020
GSE159488	A versatile platform for locus-scale genome rewriting and verification	Other	Homo sapiens Mus musculus synthetic construct	44	BW SRA Run Selector	Mathew T Maurano	Jan 14, 2021
GSE167358	Distal and proximal cis-regulatory elements sense X-dosage and developmental state at the Xist locus	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus synthetic construct	164	BW HIC NARROWPEAK	Till Schwämmle	Mar 04, 2021
GSE183453	R-loop landscapes during parental-to-zygotic transition in zebrafish	Other Expression profiling by high throughput sequencing	Arabidopsis thaliana Danio rerio Escherichia coli synthetic construct	60	BW SRA Run Selector	li kuan	May 29, 2024