GEO Browser - GEO

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98 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Rattus norvegicus		BW
GSE120081	Profiling of gene expression using RNA-Seq in fibroblasts, iPSCs, iPSC-derived neurons and cells overexpressing Onecut transcription factors	Expression profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	20	BW SRA Run Selector	Kees Albers	Apr 05, 2019
GSE120083	Profiling of chromatin accessibility in fibroblasts, iPSCs, iPSC-derived neurons and cells overexpressing Onecut transcription factors (OC1, OC2, OC3)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	20	BW SRA Run Selector	Kees Albers	Apr 05, 2019
GSE120131	Changes in chromatin accessibility and gene expression induced by overexpression of ONECUT transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	40	BW	Kees Albers	Apr 05, 2019
GSE81669	DNase Hypersensitivity Peaks from Rat Schwann Cells	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	3	BW SRA Run Selector	Anthony Antonellis	Aug 24, 2017
GSE78688	Activity-dependent transcriptional changes in human neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	43	BW SRA Run Selector	Bulent Ataman	Nov 02, 2016
GSE182933	Time-restricted feeding prevents deleterious metabolic effects of circadian disruption through epigenetic control of β-cell function [ChIPseq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BED BW SRA Run Selector	Matthew R Brown	Nov 24, 2021
GSE182938	Time-restricted feeding prevents deleterious metabolic effects of circadian disruption through epigenetic control of β-cell function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	62	BED BW H5 TSV	Matthew R Brown	Nov 24, 2021
GSE160806	Hippocampal GR and pCREB binding analysis of glucocorticoid enhanced memory formation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	36	BW TSV SRA Run Selector	Jacobus Cornelis Buurstede	Apr 19, 2021
GSE160808	Hippocampal GR/pCREB binding and transciptome analysis of glucocorticoid enhanced memory formation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Rattus norvegicus	60	BW	Jacobus Cornelis Buurstede	Apr 19, 2021
GSE114191	Repurposing of promoters and enhancers during mammalian evolution	Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus Oryctolagus cuniculus Rattus norvegicus	78	BW SRA Run Selector	Francesco Nicola Carelli	Oct 01, 2018
GSE245064	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	18	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE245067	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	44	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE232960	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	6	BW	Miao Cui	Oct 13, 2023
GSE232963	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	12	BW H5 PNG	Miao Cui	Oct 13, 2023
GSE85337	Natural Selection has Shaped Coding and Non-coding Transcription in Primate CD4+ T-cells	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes Rattus norvegicus	24	BW SRA Run Selector	Charles G Danko	Dec 29, 2016
GSE243792	A p53-topoisome replaces the acutely genotoxic MYC- topoisome to empower DNA-damage repair in cells	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	9	BW	Subhendu kumar Das	Oct 30, 2024
GSE154063	Transcriptome profile of ENDOC-BH1 cells and isolated murine islets modulating TFEB expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	74	BW TXT	Rossella De Cegli	Jul 31, 2023
GSE84831	Fetal metabolic programing increases the susceptibility of cardiovascular diseases in the offspring due to maternal high-fat-diet during diabetic pregnancy	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	32	BW SRA Run Selector	Moul Dey	Jun 12, 2017
GSE245740	Genome-wide map of FOXO1-bound chromatin in pituitary somatotropes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BW	Buffy Sue Ellsworth	Dec 14, 2023
GSE226498	Epigenetic evolution of the Ly49 gene family [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	27	BW	Changxu Fan	Apr 20, 2024