GEO Browser - GEO

Series

Samples

Platforms

DataSets

6323 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Rattus norvegicus
GSE28782	Chromatin occupancy of TCF7L2 in hepatocytes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BAM TXT SRA Run Selector	Luke Norton	Sep 12, 2011
GSE22878	Rapid transcription of arc/arg3.1 and other very fast immediate early genes in response to neuronal activity is mediated by a stalled RNA polymerase II mechanism	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	1	BED SRA Run Selector	Ramendra N Saha	May 24, 2011
GSE26871	Genome wide profiling of PAX8 binding stes in PCCL3 rat cells	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BED WIG SRA Run Selector	Pilar Santisteban	Jun 28, 2012
GSE26938	Global analysis of in vivo Pax8-binding sites in rat thyroid cells using high-throughput technologies: Chip-Seq and whole genome expression arrays	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Rattus norvegicus	18	BED TXT WIG	Pilar Santisteban	Jun 28, 2012
GSE30198	Digital gene expression and global mapping of polyadenylation sites with PolyA-Seq	Expression profiling by high throughput sequencing	Canis lupus familiaris Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus	26	BED SRA Run Selector	Adnan Derti	Jun 25, 2011
GSE38056	Novel long non-coding RNAs are involved in cellular response to angiotensin II signaling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Rattus norvegicus	8	BED TXT SRA Run Selector	Amy Leung	Jun 30, 2013
GSE38571	Integrated transcriptomic and epigenomic analysis of primary human lung cell differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	38	BED TXT	Crystal N Marconett	Apr 15, 2013
GSE42207	Rodent trophoblast epigenome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	26	BED TXT SRA Run Selector	Edward Chuong	Dec 04, 2012
GSE42447	Activation of the chromatin-remodeling factor Smarca4/Brg1 cooperates with Olig2 to establish oligodendrocyte identity and control CNS myelination [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	17	BED SRA Run Selector	Yang Yu	Jan 20, 2013
GSE42454	Activation of the chromatin-remodeling factor Smarca4/Brg1 cooperates with Olig2 to establish oligodendrocyte identity and control CNS myelination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	19	BED	Yang Yu	Jan 20, 2013
GSE42776	Genome-wide analysis of acetylated H4K5 binding offers new insights into the acute and chronic effects of METH on gene expression in the dorsal striatum	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	5	BED WIG SRA Run Selector	Jean Lud Cadet	Feb 28, 2013
GSE46820	Genome wide maps of H3K4me3 and H3ac histone modifications in C6 rat glioma cells [Illumina]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	3	BED SRA Run Selector	Marcin Kruczyk	May 07, 2015
GSE46822	Genome wide map of H3K4me3 histone modification in C6 rat glioma cells [SOLiD]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BED SRA Run Selector	Marcin Kruczyk	May 07, 2015
GSE47020	Genome wide map of Stat3 binding sites in C6 rat glioma cells [NimbleGen]	Genome binding/occupancy profiling by genome tiling array	Rattus norvegicus	2	BED PAIR	Marcin Kruczyk	May 07, 2015
GSE47021	Integration of genome-wide Stat3 binding and epigenetic modifications with transcriptome allowed identification of novel Stat3 target genes in glioma cells	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Rattus norvegicus	7	BED PAIR	Marcin Kruczyk	May 07, 2015
GSE48321	High-Resolution Profiling of Novel Transcribed Regions During Rat Spermatogenesis	Expression profiling by high throughput sequencing	Rattus norvegicus	8	BED GTF TXT SRA Run Selector	Frédéric Chalmel	Jun 01, 2014
GSE50935	Genome wide effects of maternal undernutrition	Methylation profiling by high throughput sequencing	Rattus norvegicus	3	BED WIG SRA Run Selector	Gioia Altobelli	May 20, 2014
GSE57232	ChIP-seq experiment analyzing binding of HDAC2 and HDAC3 to genomic loci in rat Neural Stem Cells	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	8	BED SRA Run Selector	Ola Hermanson	Jun 17, 2014
GSE61204	Global MEF2 target gene analysis in cardiac and skeletal muscle reveals novel regulation of DUSP6 by p38MAPKMEF2 signaling [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	4	BED SRA Run Selector	John C McDermott	Sep 09, 2014
GSE61207	Global MEF2 target gene analysis in cardiac and skeletal muscle reveals novel regulation of DUSP6 by p38MAPKMEF2 signaling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	8	BED TXT	John C McDermott	Sep 09, 2014