GEO Browser - GEO

Series

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DataSets

32 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057		Rattus norvegicus
GSE78688	Activity-dependent transcriptional changes in human neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	43	BW SRA Run Selector	Bulent Ataman	Nov 02, 2016
GSE85337	Natural Selection has Shaped Coding and Non-coding Transcription in Primate CD4+ T-cells	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes Rattus norvegicus	24	BW SRA Run Selector	Charles G Danko	Dec 29, 2016
GSE92247	Neonatal Transplantation Confers Maturation of PSC-Derived Cardiomyocytes Conducive to Modeling Cardiomyopathy	Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	24	CSV SRA Run Selector	Chulan Kwon	Dec 13, 2016
GSE97047	Wound regeneration deficit in rats correlates with low morphogenetic potential and distinct transcriptome profile of epidermis	Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	18	TXT SRA Run Selector	Maksim V Plikus	Jan 03, 2018
GSE101918	Species and Cell-Type Properties of Classically Defined Human and Rodent Neurons and Glia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	114	TDF TXT	Xiao Xu	Oct 12, 2018
GSE111134	A compendium of conserved cleavage and polyadenylation events in mammalian genes	Other	Homo sapiens Mus musculus Rattus norvegicus	128	TXT SRA Run Selector	Bin Tian	Aug 08, 2018
GSE112622	LTR retrotransposons transcribed in oocytes drive species-specific and heritable changes in DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	10	BW SRA Run Selector	Matthew C Lorincz	Jul 06, 2018
GSE117321	Distinct microglial transcriptional responses during opioid exposure or neuropathic pain	Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	50		Gregory Scherrer	Jan 03, 2022
GSE119630	Extraction-Free Whole Transcriptome Profiling from Specific Subareas of Unstained or H&E Stained FFPE Tissues	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	155	CSV SRA Run Selector	Milos Babic	Sep 08, 2018
GSE128992	Identification of renal resident macrophages across species [10X]	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus Sus scrofa	4	TXT SRA Run Selector	Kurt Zimmerman	Apr 05, 2019
GSE128993	Identification of renal resident macrophages across species	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus Sus scrofa	101	TXT	Kurt Zimmerman	Apr 05, 2019
GSE134705	Cross-species analysis across 450 million years of evolution reveals conservation and divergence of the microglia program (scRNA-seq)	Expression profiling by high throughput sequencing	Callithrix jacchus Danio rerio Gallus gallus Homo sapiens Macaca fascicularis Mesocricetus auratus Mus musculus Nannospalax galili Ovis aries Rattus norvegicus	37	TXT SRA Run Selector	Ido Amit	Dec 12, 2019
GSE134706	Cross-species analysis across 450 million years of evolution reveals conservation and divergence of the microglia program (bulk RNA-seq)	Expression profiling by high throughput sequencing	Callithrix jacchus Danio rerio Gallus gallus Homo sapiens Macaca fascicularis Mesocricetus auratus Mus musculus Ovis aries Rattus norvegicus	44	TXT SRA Run Selector	Ido Amit	Dec 12, 2019
GSE134707	Cross-species analysis across 450 million years of evolution reveals conservation and divergence of the microglia program	Expression profiling by high throughput sequencing	Callithrix jacchus Danio rerio Gallus gallus Homo sapiens Macaca fascicularis Mesocricetus auratus Mus musculus Nannospalax galili Ovis aries Rattus norvegicus	81	TXT	Ido Amit	Dec 12, 2019
GSE137473	A systems approach delivers a functional microRNA catalog and expanded targets for seizure suppression in temporal lobe epilepsy	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	114	TXT SRA Run Selector	Morten T Veno	Jun 10, 2020
GSE140887	Gut microbiota regulates tumor via circRNA/miRNA networks	Non-coding RNA profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	33	GPR TXT	X XX	Oct 13, 2020
GSE142201	Keystone genes for tooth development	Expression profiling by array Expression profiling by high throughput sequencing	Mus musculus Myodes glareolus Rattus norvegicus	67	CEL	Jukka Jernvall	Nov 01, 2020
GSE142366	Dynamic transcriptional responses to injury of regenerative and non-regenerative cardiomyocytes revealed by single-nucleus RNA sequencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	18	BED CSV H5 MTX TBI TSV	Zhaoning Wang	Mar 18, 2020
GSE142541	Redefining the heterogeneity of peripheral nerve cells in health and autoimmunity	Expression profiling by high throughput sequencing	Mus musculus Rattus norvegicus	11	CSV MTX TSV SRA Run Selector	Michael Heming	Apr 01, 2020
GSE147432	TDP-43 dysfunction restricts dendritic complexity by inhibiting CREB activation and altering gene expression	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	20	BEDGRAPH FPKM_TRACKING SRA Run Selector	WEIJIN XU	Mar 26, 2020