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7829 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		TSV
GSE7892	Global analysis of gene expression in MEF cells and villi enterocytes expressing SV40 T antigens	Expression profiling by array	Mus musculus	30	TSV TXT	Daniel Clark	Sep 01, 2009
GSE7906	Cell-type Specific Regulation of Gene Expression by Simian Virus 40 T antigens	Expression profiling by array	Mus musculus Rattus norvegicus	35	CEL TSV TXT	Daniel Clark	Sep 01, 2009
GSE11528	Gene expression data from mouse postnatal brain development	Expression profiling by array	Mus musculus Mus spretus	18	CEL TSV	Mehmet Somel	Mar 10, 2009
GSE14012	Role of the reprogramming factors in inducing pluripotency	Expression profiling by array Genome binding/occupancy profiling by array	Mus musculus	39	CEL TSV	Kathrin Plath	Jan 28, 2009
GSE17064	Genome-wide identification of Polycomb-associated RNAs by RIP-seq	Expression profiling by high throughput sequencing	Mus musculus	7	TSV SRA Run Selector	Mark L Borowsky	Dec 22, 2010
GSE27243	A Transcriptomic Atlas of Mouse Neocortical Layers	Expression profiling by high throughput sequencing	Mus musculus	19	BAM GTF TSV WIG SRA Run Selector	T Grant Belgard	Aug 24, 2011
GSE29613	Sequencing of microRNA in spermatogonial stem cell enriched cell populations.	Non-coding RNA profiling by high throughput sequencing	Mus musculus	5	TSV SRA Run Selector	Zhiyv Niu	Jul 20, 2011
GSE30202	DNA binding factors shape the mouse methylome at distal regulatory regions [BIS_seq]	Methylation profiling by high throughput sequencing	Mus musculus	4	TSV SRA Run Selector	Dirk Schuebeler	Dec 09, 2011
GSE35213	T-cell factor 4 and β-catenin chromatin occupancies pattern zonal liver metabolism.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED TSV SRA Run Selector	Philippe Veber	Jan 18, 2014
GSE37933	Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention	Expression profiling by high throughput sequencing	Mus musculus	3	TSV SRA Run Selector	Brad A Friedman	Jul 12, 2012
GSE39502	Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED PDF TSV WIG SRA Run Selector	Sebastien Vigneau	Oct 11, 2013
GSE39522	Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	2	TSV WIG SRA Run Selector	Sebastien Vigneau	Oct 11, 2013
GSE39523	Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED TSV WIG	Sebastien Vigneau	Oct 11, 2013
GSE39736	Transcription factor occupancy is linked to DNA methylation turnover at active regulatory regions [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	3	TSV SRA Run Selector	Dirk Schuebeler	Dec 24, 2013
GSE39739	Transcription factor occupancy is linked to DNA methylation turnover at active regulatory regions	Methylation profiling by high throughput sequencing	Mus musculus	10	TSV WIG	Dirk Schuebeler	Dec 24, 2013
GSE40948	Genome-wide nucleosome positioning during embryonic stem cell development [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	5	BED TSV SRA Run Selector	Vladimir B Teif	Oct 21, 2012
GSE41222	Deciphering the genetics of mammalian limb growth	Expression profiling by high throughput sequencing	Mus musculus	4	TSV SRA Run Selector	Pedro Coutinho	Jan 01, 2014
GSE42132	ChIP-seq analysis of Gli1 and Sox2 input to neural progenitor program and integration with actve histone marks	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED TSV SRA Run Selector	Kevin Peterson	Dec 15, 2012
GSE42474	Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes [ChIP-Seq and RNA-seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	9	TSV WIG SRA Run Selector	Richard A Young	Jan 02, 2013
GSE42594	cis-Regulation of Shh-directed neural pattering	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	16	BED CEL TSV	Kevin Peterson	Dec 15, 2012