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909 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		TAR
GSE186158	Single-cell transcriptomic atlas reveals the evolution of immune cells and molecules across multiple vertebrate species	Expression profiling by high throughput sequencing	Xenopus tropicalis Sus scrofa Rattus norvegicus Mus musculus Macaca mulatta Homo sapiens Danio rerio	7	TAR SRA Run Selector	Cangang Zhang	Jan 30, 2023
GSE150858	Barcoded viral tracing of single-cell interactions in CNS inflammation	Other Expression profiling by high throughput sequencing	unidentified plasmid Suid alphaherpesvirus 1 Mus musculus	128	CSV TAR TSV TXT ZIP	Michael Wheeler	Apr 22, 2021
GSE207360	Mesenchymal glioma stem cells trigger vasectasia, a distinct neovascularization process mediated by extracellular vesicles carrying EGFR [scRNA-seq]	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	45	DCC PKC RDS TAR XLSX	Janusz Rak	Mar 04, 2024
GSE220949	Reconstructing regulative progenitor behaviors in synthetic embryos	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	29	TAR TSV TXT	Helene Kretzmer	Mar 05, 2024
GSE227044	High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing [ISS, Cartana]	Other	synthetic construct Mus musculus	6	TAR	Haojia Wu	Jan 17, 2024
GSE227046	High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	7	TAR	Haojia Wu	Jan 17, 2024
GSE251926	Open-ST: High-resolution spatial transcriptomics in 3D	Other	synthetic construct Mus musculus Homo sapiens	27	CSV H5AD TAR	Daniel León-Perinán	Jun 23, 2024
GSE258835	Ankrd11, a chromatin regulator and a KBG syndrome risk gene, is a critical regulator of cardiac neural crest cell biology and heart development [MERSCOPE]	Other	synthetic construct Mus musculus	6	CSV TAR	Petrecca Kevin	Feb 25, 2024
GSE269516	Multiplexed inhibition of immunosuppressive genes with Cas13d for on-demand combinatorial cancer immunotherapy	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Mus	46	TAR TSV TXT	Sidi Chen	Dec 05, 2024
GSE63330	DNA methylation in mammalian placentas	Methylation profiling by high throughput sequencing	Saimiri boliviensis Mus musculus Monodelphis domestica Macaca mulatta Homo sapiens Equus caballus Canis lupus familiaris Bos taurus	20	TAR SRA Run Selector	Janine LaSalle	Aug 05, 2015
GSE168455	Parallel tracking dosage compensation in the early mouse embryo	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus castaneus Mus musculus	235	TAR TXT SRA Run Selector	Chunyao Wei	Mar 15, 2024
GSE20187	Tracing the derivation of embryonic stem cells from the inner cell mass by single cell RNA-seq analysis	Expression profiling by high throughput sequencing	Mus musculus	34	TAR TXT	Catalin Barbacioru	May 10, 2010
GSE26729	The Nucleosome Map of the Mammalian Liver	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED TAR SRA Run Selector	Jonathan Schug	Apr 30, 2011
GSE29913	Genome-wide distribution maps of histone variants H2A.Lap1 and H2A.Z in 30do mouse spermatids [ChIP_seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TAR SRA Run Selector	Rohan Williams	Jan 20, 2012
GSE29916	Functional studies of a H2A.Bbd-like histone variant in mouse spermatogenesis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	CEL TAR	Rohan Williams	Jan 20, 2012
GSE48358	Epigenetic modifications induced by Blimp-1 regulate CD8+ T cell memory progression during acute virus infection	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED TAR TXT SRA Run Selector	Hyun Mu Shin	Oct 10, 2013
GSE48763	Cohesin-based chromatin interactions enable regulated gene expression within pre-existing architectural compartments.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	13	BED TAR TXT SRA Run Selector	Andre J Faure	Aug 13, 2013
GSE49113	Epigenetic reprogramming in pancreatic acinar cell in the absence of MIST1	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	FA TAR TXT SRA Run Selector	Christopher Pin	Jul 21, 2014
GSE59027	Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation	Other	Mus musculus	6	TAR SRA Run Selector	Josee Dostie	Dec 30, 2015
GSE63137	Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	31	BED BW TAR TXT SRA Run Selector	Alisa Mo	Jun 17, 2015