284 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterMus musculus Remove filterHIC
A three-dimensional map of the human genome at kilobase resolution reveals prinicples of chromatin looping
200 Suhas Rao Dec 11, 2014
The energetics and physiological impact of cohesin extrusion
352 Seolkyoung Jung May 01, 2018
BAZ2A safeguards genome architecture of ground-state pluripotent stem cells
  • Link icon Mus musculus
49 Raffaella Santoro Oct 20, 2020
Enhancer-dependence of gene expression increases with developmental age
  • Link icon Mus musculus
39 Jialiang Huang Aug 19, 2020
Megadomains and superloops form dynamically during X-chromosome inactivation but are dispensable for silencing and escape
  • Link icon Mus musculus
65 John Edward Froberg Oct 31, 2018
Serial Inversions Induce Tissue-specific Architectural Stripes, Gene Misexpression and Congenital Malformations [Hi-C]
  • Link icon Mus musculus
3 Andreas Magg Nov 19, 2018
Long-range epigenetic concordance revealed by simultaneous profiling of DNA methylation and chromosomal conformation changes in bulk and single cell Methyl-HiC
  • Link icon Mus musculus
48 Guoqiang Li Nov 16, 2018
MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments
  • Link icon Mus musculus
10 Miao Yu Apr 05, 2019
Selective Disruption of Core Regulatory Transcription
109 Javed Khan May 31, 2019
Single-cell chromatin conformation capture of mouse sensory neurons in visual and olfactory systems by Dip-C
  • Link icon Mus musculus
409 Longzhi Tan Feb 04, 2019
Analysis of 3D interactions identifies candidate host genes that transposable elements potentially regulate
24 Ramya Raviram Nov 28, 2018
CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming
  • Link icon Mus musculus
187 ya wei song Apr 05, 2022
Epigenomic analysis of gastrulation identifies a unique chromatin state for primed pluripotency
  • Link icon Mus musculus
104 Wei Xie Dec 18, 2019
Pax3 cooperates with Ldb1 to direct local chromosome architecture during lineage specification
  • Link icon Mus musculus
60 Alessandro Magli Apr 16, 2019
The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination
  • Link icon Mus musculus
133 Frederick W Alt Aug 19, 2019
The chromatin remodeling enzyme Chd4 regulates genome architecture in the mouse brain
  • Link icon Mus musculus
38 Jared V Goodman Apr 13, 2020
N1E-115 cells and sorted NOS1+ mouse enteric neurons
  • Link icon Mus musculus
86 Tamas Ordog Feb 14, 2024
Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation
  • Link icon Mus musculus
122 Nishana Mayilaadumveettil Apr 14, 2020
Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus
  • Link icon Mus musculus
170 Meinrad Busslinger Jul 01, 2020
A role of the CTCF binding site at enhancer Ea in Tcra rearrangement
  • Link icon Mus musculus
40 Hao bingtao Feb 13, 2020