GEO Browser - GEO

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309 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Mus musculus		GTF
GSE20846	Transcript assembly and abundance estimation from RNA-Seq reveals thousands of new transcripts and switching among isoforms	Expression profiling by high throughput sequencing	Mus musculus	4	GTF SAM SRA Run Selector	Cole Trapnell	Apr 14, 2010
GSE27243	A Transcriptomic Atlas of Mouse Neocortical Layers	Expression profiling by high throughput sequencing	Mus musculus	19	BAM GTF TSV WIG SRA Run Selector	T Grant Belgard	Aug 24, 2011
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE38596	Genome-wide maps of cytosine methylation, cytosine hydroxylmethylation and small non coding RNAs in mouse ES cells and upon guided differentiation to mesoendoderm cells	Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Sep 22, 2012
GSE38907	KSRP-mediated Transcriptome reshaping	Expression profiling by high throughput sequencing	Mus musculus	3	GTF SRA Run Selector	Gabriele Bucci	Jun 25, 2013
GSE40890	Characteristics of Cross-Hybridization and Cross-Alignment in Pseudo-Xenograft samples by RNA-Seq and Microarrays [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	19	GTF TXT SRA Run Selector	Camilo Valdes	Dec 14, 2012
GSE41637	Evolutionary dynamics of gene and isoform regulation in mammalian tissues	Expression profiling by high throughput sequencing	Bos taurus Gallus gallus Macaca mulatta Mus musculus Rattus norvegicus	134	GTF SRA Run Selector	Jason Merkin	Dec 21, 2012
GSE42805	Chronic cocaine-regulated epigenome in mouse [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	12	DIFF GTF SRA Run Selector	Li Shen	Feb 14, 2014
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Acomys cahirinus Bos taurus Canis lupus familiaris Capra hircus Cavia porcellus Chlorocebus aethiops Equus caballus Erinaceus europaeus Felis catus Meles meles Meriones unguiculatus Mesocricetus auratus Murina leucogaster Mus musculus Oryctolagus cuniculus Peromyscus leucopus Petaurus breviceps Rattus norvegicus Suncus murinus Sus scrofa Tadarida brasiliensis Tamias sibiricus Ursus americanus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE45119	Gene Expression and Exon Splicing Change Analysis of Mouse N2A Cell Transcriptome upon Polypyrimidine tract-binding protein depletion.	Expression profiling by high throughput sequencing	Mus musculus	2	BW GTF TXT SRA Run Selector	Areum Han	Dec 01, 2013
GSE46213	Role of RelA:CBP/p300 interaction on RelA-activated genes	Expression profiling by high throughput sequencing	Mus musculus	18	FPKM_TRACKING GTF SRA Run Selector	Harry Aaron Birnbaum	Sep 09, 2013
GSE47019	Developmentally Abnormal Human Embryos Trigger a Maternal ER Stress Response	Expression profiling by high throughput sequencing	Mus musculus	9	GTF SRA Run Selector	Jan J Brosens	Feb 11, 2014
GSE47083	Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	3	GTF XLSX SRA Run Selector	Tõnis Org	Jan 01, 2015
GSE47085	Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array Methylation profiling by high throughput sequencing	Mus musculus	47	BW CEL GTF	Tõnis Org	Jan 01, 2015
GSE48138	Expression and regulation of lincRNAs during T cell development and differentiation	Expression profiling by high throughput sequencing	Mus musculus	122	BEDGRAPH GTF TXT SRA Run Selector	Gangqing Hu	Sep 23, 2013
GSE48305	Orchestrated intron retention regulates normal granulocyte differentiation [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	5	GTF SRA Run Selector	william ritchie	Jun 27, 2013
GSE48307	Orchestrated intron retention regulates normal granulocyte differentiation	Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	11	CEL GTF	william ritchie	Jun 27, 2013
GSE49233	A Unifying Model for Molecular Determinants of the Pre-selection Vb Repertoire [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	1	GTF SRA Run Selector	Eugene M Oltz	Aug 14, 2013
GSE49234	A Unifying Model for Molecular Determinants of the Pre-selection Vb Repertoire	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Mus musculus	5	GFF GTF PAIR	Eugene M Oltz	Aug 14, 2013
GSE49417	The conserved organization of the human and mouse transcriptomes	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	64	BAM BEDRNAELEMENTS BIGWIG GFF GTF PDF	ENCODE DCC	Nov 20, 2014