GEO Browser - GEO

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36 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247		Mus musculus		VCF
GSE158506	Fat1 deletion promotes hybrid EMT state with enhanced tumor progression, stemness, and metastasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	62	BEDGRAPH TXT VCF	Yura Song	Dec 04, 2020
GSE168363	In vivo adenine base editing of PCSK9 in mice and macaques reduces LDL-cholesterol levels [RNA-seq]	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	22	TSV VCF SRA Run Selector	Tanja Rothgangl	Apr 13, 2021
GSE168365	In vivo adenine base editing of PCSK9 in mice and macaques reduces LDL-cholesterol levels	Expression profiling by high throughput sequencing Other	Homo sapiens Macaca fascicularis Mus musculus	529	TSV TXT VCF	Tanja Rothgangl	Apr 13, 2021
GSE274641	Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues	Other	Homo sapiens Mus musculus	11	RDS VCF XLSX	Rong Fan	Aug 12, 2024
GSE115017	Whole exome sequencing analyzed the off-target effect of gene editing through BE3 system.	Genome variation profiling by high throughput sequencing	Mus musculus	14	VCF SRA Run Selector	Qing Li	Aug 06, 2018
GSE138124	Exome Sequencing of Ackr4-deficient mice in generation 12 (backcrossing to C57BL/6)	Other	Mus musculus	3	VCF SRA Run Selector	Nadine Eckert	Dec 21, 2019
GSE145557	A novel neural stem cell-derived immunocompetent mouse model of glioblastoma for preclinical studies (RNA-Seq)	Expression profiling by high throughput sequencing	Mus musculus	8	CSV VCF SRA Run Selector	Bernhard Radlwimmer	Jan 27, 2021
GSE148478	Stimulation of oncogene-specific tumor infiltrating T-cells through combined vaccine and alpha-PD1 enable sustained anti-tumor responses against established HER2 breast cancer (BC) [WXS]	Genome variation profiling by high throughput sequencing	Mus musculus	20	VCF SRA Run Selector	Zachary Conrad Hartman	Apr 11, 2020
GSE148482	Stimulation of oncogene-specific tumor infiltrating T-cells through combined vaccine and alpha-PD1 enable sustained anti-tumor responses against established HER2 breast cancer (BC)	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	70	CSV TSV TXT VCF	Zachary Conrad Hartman	Apr 11, 2020
GSE149444	MYC drives temporal evolution of small cell lung cancer subtypes by reprogramming neuroendocrine fate [WGS data]	Other	Mus musculus	3	VCF SRA Run Selector	Trudy Oliver	May 28, 2020
GSE158474	Genetically defined syngeneic mouse models of ovarian cancer as tools for the discovery of combination immunotherapy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	MTX TSV VCF	Sonia Iyer	Nov 17, 2020
GSE158719	Low read depth whole genome sequencing of mouse Cre-loxP-induced Ewsr1-Atf1 translocation tumors	Other	Mus musculus	5	VCF SRA Run Selector	Jinxiu Li	Sep 30, 2020
GSE158726	Cre-loxP-induced Ewsr1-Atf1 translocation tumors	Expression profiling by high throughput sequencing Other	Mus musculus	25	VCF	Jinxiu Li	Sep 30, 2020
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	271	BED MTX SEG TSV VCF	Mark Dawson	Nov 08, 2021
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476	BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE165136	SNP effect on chromatin accessibility (Whole genome sequencing)	Genome variation profiling by high throughput sequencing	Mus musculus	3	VCF SRA Run Selector	Yongbing Zhao	Jul 21, 2022
GSE169196	Overcoming microenvironmental resistance to anti-PD-1 immunotherapy in lung cancer models	Expression profiling by high throughput sequencing Other	Mus musculus	48	TXT VCF	Nadine Fournier	Aug 15, 2021
GSE172106	Multi-omic profiling of lung and liver tumor microenvironments of metastatic pancreatic cancer reveals site-specific immune-regulatory features	Expression profiling by high throughput sequencing Other	Mus musculus	32	VCF	Won Jin Ho	Apr 15, 2021
GSE208366	Whole genome sequencing of mouse sarcoma clones	Other	Mus musculus	10	TBI VCF	jianhong ou	May 24, 2024
GSE208367	COMPASS complex inhibition targets the metastasis initiating cell in undifferentiated pleomorphic sarcoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	26	BIGWIG TBI VCF	jianhong ou	May 24, 2024