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3199 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247		Mus musculus		TSV
GSE240583	Baf155 establishes chromatin priming to promote hematopoietic regeneration and function [single cell multiome - ATAC + GEX]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	ARROW MTX RDS TSV	Changxu Fan	Jul 09, 2024
GSE240585	Baf155 controls hematopoietic differentiation and regeneration through chromatin priming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	ARROW BW MTX TSV	Changxu Fan	Jul 08, 2024
GSE148448	Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells	Other	Homo sapiens Mus musculus	27	BAM CSV LOOM TSV TXT SRA Run Selector	Robi D Mitra	Jul 23, 2020
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE133646	Open chromatin analysis of hair follcile stem cell quiescence	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CSV TSV SRA Run Selector	Chi Zhang	Sep 30, 2021
GSE133648	Escape of hair follicle stem cells from a defective niche	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	16	BED CSV MTX TSV TXT	Chi Zhang	Sep 30, 2021
GSE134053	Histone H2AK119 Mono-Ubiquitination is Essential for Polycomb-Mediated Transcriptional Repression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	99	BED TSV SRA Run Selector	Diego Pasini	Dec 26, 2019
GSE141587	Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	49	BED BW TSV TXT SRA Run Selector	Joseph R Ecker	May 23, 2022
GSE141825	Single-cell ATAC-seq of mouse thymus iNKT cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED CSV H5 MTX TBI TSV SRA Run Selector	Indra Adrianto	Jun 27, 2023
GSE143148	The histone demethylase JMJD2B regulates endothelial-to-mesenchymal transition [HTS]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED CSV TSV SRA Run Selector	David John	Jan 08, 2020
GSE144693	Beta cell-specific CD8+ T cells maintain stem-cell memory-associated epigenetic programs during type 1 diabetes	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	39	BED MTX TSV	yiping fan	Apr 07, 2020
GSE146250	Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	78	BED BW TSV	Beisi Xu	Dec 14, 2021
GSE148432	Role of Prdm16 in fibro-adipogenic progenitors	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	21	BED TSV SRA Run Selector	Chiara Mozzetta	Jun 02, 2021
GSE148695	SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	148	BED BW MTX TSV	Wei Gu	Oct 05, 2021
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE155430	A single-cell epigenetic atlas of human IDH-mutant glioma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED MTX TSV TXT	Aaron Diaz	Oct 20, 2021
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE156950	Single cell ATAC sequencing profile of a unique mesenchymal progenitor subset from the developing murine forelimb	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED MTX TSV SRA Run Selector	Tully Michael Underhill	Jul 15, 2022
GSE156953	Single cell sequencing profile of a unique mesenchymal progenitor subset from the developing murine forelimb	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED MTX TSV	Tully Michael Underhill	Jul 15, 2022