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4278 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057		Mus musculus		TXT
GSE193472	Optocoder: computational decoding of spatially indexed bead arrays	Expression profiling by high throughput sequencing	unidentified Mus musculus	4	TXT	Nikos Karaiskos	Jun 24, 2022
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE80973	Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction	Methylation profiling by high throughput sequencing	synthetic construct Mus musculus	10	TXT SRA Run Selector	Siddharth Subhas Dey	May 03, 2016
GSE83992	An improved method for identifying biological circular RNAs	Expression profiling by high throughput sequencing	synthetic construct Mus musculus	12	TXT SRA Run Selector	Wei Yan	Jul 05, 2016
GSE109262	Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	synthetic construct Mus musculus	244	TSV TXT SRA Run Selector	Felix Krueger	Jan 17, 2018
GSE115547	Determination of branch point (BP) usage by wild-type and mutant SF3B1 using a minigene library	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	7	TXT SRA Run Selector	MANOJ PILLAI	Oct 30, 2018
GSE145643	Functional characterization of thousands of type 2 diabetes-associated and chromatin-modulating variants under steady state and endoplasmic reticulum stress	Other	synthetic construct Mus musculus	9	FA TXT SRA Run Selector	Shubham Khetan	Feb 21, 2020
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	synthetic construct Mus musculus	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE161657	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution (primary leukaemia barcode-seq)	Other	synthetic construct Mus musculus	14	FASTA TXT SRA Run Selector	Mark Dawson	Nov 08, 2021
GSE167352	Non-coding CRISPR interference screen to identify regulatory elements of Xist in TX1072 XX SP107 mESCs at the onset of random X inactivation	Other	synthetic construct Mus musculus	11	TXT SRA Run Selector	Till Schwämmle	Mar 04, 2021
GSE169020	MapToCleave: high-throughput profiling of microRNA biogenesis in living cells	Non-coding RNA profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	56	TXT SRA Run Selector	Marc Riemer Friedländer	Nov 16, 2021
GSE192435	CRISPR and biochemical screens Identify MAZ as a co-factor in CTCF-mediated insulation at Hox Clusters [CRISPR_set8]	Other	synthetic construct Mus musculus	13	TXT SRA Run Selector	Danny Reinberg	Feb 06, 2022
GSE198728	Paired single-cell host profiling with multiplex-tagged bacterial mutants reveals intracellular virulence-immune networks	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus	136	TXT	Noa Bossel Ben-Moshe	Jun 21, 2023
GSE210051	DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy [DNA barcodes: IT_and_cont_4T1_BC250000]	Other	synthetic construct Mus musculus	34	TXT XLSX	Alexander Swarbrick	Aug 02, 2022
GSE215065	Regulation of mouse chamber selective enhancers	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	synthetic construct Mus musculus	82	BW TXT	Xiaoran Zhang	Jan 30, 2023
GSE225867	Transcription factor interactions explain the context-dependent activity of CRX binding sites	Other	synthetic construct Mus musculus	4	FA TXT	Michael Aaron White	Mar 05, 2023
GSE233343	A ligation-independent sequencing method reveals tRNA fragments with blocked 3' termini	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	synthetic construct Mus musculus	105	TXT XLSX	Emily Shields	Jun 06, 2023
GSE237551	Macrophage Mannose receptor (MRC1) mediates uptake of dextran in murine bone-marrow derived macrophages via a receptor-mediated endocytic process	Other	synthetic construct Mus musculus	9	CSV TXT	Natalie W Thiex	Oct 01, 2023
GSE128992	Identification of renal resident macrophages across species [10X]	Expression profiling by high throughput sequencing	Sus scrofa Rattus norvegicus Mus musculus Homo sapiens	4	TXT SRA Run Selector	Kurt Zimmerman	Apr 05, 2019
GSE128993	Identification of renal resident macrophages across species	Expression profiling by high throughput sequencing	Sus scrofa Rattus norvegicus Mus musculus Homo sapiens	101	TXT	Kurt Zimmerman	Apr 05, 2019