GEO Browser - GEO

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466 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417		Mus musculus		TXT
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE38596	Genome-wide maps of cytosine methylation, cytosine hydroxylmethylation and small non coding RNAs in mouse ES cells and upon guided differentiation to mesoendoderm cells	Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Sep 22, 2012
GSE43078	The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse	Expression profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Frederic Koch	Jan 28, 2013
GSE44935	The Role of Tet1 During Somatic Cell Reprogramming	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	7	BED TXT SRA Run Selector	Lihui Lin	Mar 08, 2013
GSE45157	Trans-chromosomal regulation by a novel lincRNA required for adipogenesis that escapes X-chromosome inactivation	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	21	TAB TXT SRA Run Selector	Loyal A Goff	Jun 01, 2013
GSE48206	Gene Expression Profile for knocking down Tet1 in pre-iPSCs culturing in Vc medium.	Expression profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Lihui Lin	Oct 27, 2013
GSE51534	The THO complex regulates pluripotency gene mRNA export to control embryonic stem cell self-renewal and somatic cell reprogramming	Expression profiling by array Expression profiling by high throughput sequencing	Mus musculus	8	BW TXT	Li Wang	Nov 30, 2013
GSE52279	Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	42	CEL TXT WIG	Christopher R Vakoc	Dec 02, 2013
GSE53755	Long-range joining of intra-chromosomal DNA double-strand breaks	Genome variation profiling by high throughput sequencing	Mus musculus	13	TXT SRA Run Selector	Frederick Alt	Jan 03, 2014
GSE50907	fourSig: A Method for Determining Chromosomal Interactions in 4C-Seq Data	Other	Mus musculus	3	TXT SRA Run Selector	Rex Lee Williams	Feb 22, 2014
GSE49252	INO80 complex in the core regulatory network governing ESC self-renewal	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW TXT	Li Wang	May 16, 2014
GSE54697	Transcriptome analysis of Th9 CD4+ T cells differentiated with or without Il-1beta	Expression profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Romain Boidot	May 23, 2014
GSE58599	High-throughput sequencing of genome-wide translocations from stimulated wild-type or ATM-deficient B cells	Other	Mus musculus	16	TXT SRA Run Selector	Jiazhi Hu	Jun 18, 2014
GSE52988	Attenuated sensing of SHH underlies adaptive evolution of bovine limbs	Other	Mus musculus	3	TXT SRA Run Selector	DBM Bioinformatics Core Facility	Jun 19, 2014
GSE58101	High-resolution mapping of chromatin packaging in mouse embryonic stem cells and sperm	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BW TXT SRA Run Selector	Benjamin R Carone	Jul 08, 2014
GSE60599	Genome wide transcriptome analysis of skin harboring tissue-resident memory CD8+ T cells	Expression profiling by high throughput sequencing	Mus musculus	45	TXT SRA Run Selector	silvia ariotti	Sep 11, 2014
GSE51170	Identification of building principles of methylation states at CG rich regions by high-throughput editing of a mammalian genome	Methylation profiling by high throughput sequencing	Escherichia coli Mus musculus synthetic construct	19	TXT SRA Run Selector	Dirk Schuebeler	Sep 30, 2014
GSE54515	Small RNA analysis for fetal testes of Hsp90-alpha knockout mice	Non-coding RNA profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Kenji Ichiyanagi	Sep 30, 2014
GSE62534	Hairpin Capture of DNA End Structures reveals chromosomal DNA end structure with single nucleotide resolution	Other	Mus musculus	98	TXT SRA Run Selector	Jacqueline Payton	Dec 03, 2014
GSE53913	RNF17 referees ping-pong in mouse testes [RNAseq]	Expression profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Vasily Vagin	Dec 17, 2014