Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
---|---|---|---|---|---|---|---|---|
Filter | SRA Run Selector | Ramesh Shivdasani | ||||||
GSE62909 |
SOX15 governs a transcriptional program in human esophageal stratified epithelium and in a subset of esophageal adenocarcinomas
|
6 |
|
Ramesh Shivdasani | Nov 09, 2015 | |||
GSE70766 |
Distinct processes and transcriptional targets underlie CDX2 requirements in intestinal stem cells and differentiated villus cells
|
11 | Ramesh Shivdasani | Sep 15, 2015 | ||||
GSE71713 |
Acquired tissue-specific promoter bivalency is a basis for PRC2 necessity in adult somatic cells
|
23 | Ramesh Shivdasani | May 20, 2016 | ||||
GSE73398 |
Fixed tissue ChIP-Seq (FiT-Seq) of archived clinical samples reveals chromatin dynamics and tumor-specific enhancer profiles
|
109 |
|
Ramesh Shivdasani | Apr 25, 2016 | |||
GSE83394 |
Dynamic Reorganization of Chromatin Accessibility Signatures during Dedifferentiation of Secretory Precursors into Lgr5+ Intestinal Stem Cells
|
49 | Ramesh Shivdasani | Jun 01, 2017 | ||||
GSE97178 |
Hybrid stomach-intestinal chromatin states underlie human Barrett’s metaplasia
|
40 | Ramesh Shivdasani | Jun 03, 2021 | ||||
GSE98724 |
Transcription factor-dependent ‘anti-repressive’ mammalian enhancers exclude H3K27me3 from extended genomic domains
|
47 | Ramesh Shivdasani | Jan 11, 2018 | ||||
GSE99086 |
Retinoic Acid Related Receptor Orphan Receptor a (RORa) expressing T regulatory cells thwart type-2 cutaneous allergic inflammation
|
15 |
|
Ramesh Shivdasani | Mar 26, 2018 | |||
GSE111024 |
Extensive recovery of embryonic enhancer and gene memory stored in hypomethylated enhancer DNA.
|
52 | Ramesh Shivdasani | Mar 14, 2019 | ||||
GSE115541 |
Chromatin and tissue plasticity precede commitment to intestinal differentiation during endoderm development
|
74 |
|
Ramesh Shivdasani | Oct 26, 2018 | |||
GSE128671 |
Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters
|
47 | Ramesh Shivdasani | Jan 17, 2020 | ||||
GSE130681 |
Distinct mesenchymal cell populations generate the essential intestinal BMP signaling gradient
|
11 | Ramesh Shivdasani | Jan 17, 2020 | ||||
GSE130822 |
Ascl2-dependent cell differentiation drives regeneration of abated intestinal stem cells
|
19 | Ramesh Shivdasani | Jan 17, 2020 | ||||
GSE131265 |
Krüppel-like Factor 5 Regulates Stemness, Lineage Specification, and Regeneration of Intestinal Epithelial Stem Cells
|
5 |
|
Ramesh Shivdasani | Oct 27, 2021 | |||
GSE132379 |
Creb5 establishes the competence for Prg4 expression in articular cartilage
|
8 | Ramesh Shivdasani | Mar 16, 2021 | ||||
GSE160264 |
Transcription factor-mediated intestinal metaplasia and the role of a shadow enhancer
|
44 | Ramesh Shivdasani | Feb 21, 2022 | ||||
GSE183299 |
Cell and chromatin transitions in intestinal stem cell regeneration
|
22 | Ramesh Shivdasani | Jun 07, 2022 | ||||
GSE184158 |
Birth and delineation of the intestinal stem cell niche
|
15 |
|
Ramesh Shivdasani | Feb 08, 2023 |