18 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterSRA Run Selector Remove filterRamesh Shivdasani
GSE62909
SOX15 governs a transcriptional program in human esophageal stratified epithelium and in a subset of esophageal adenocarcinomas
6 Ramesh Shivdasani Nov 09, 2015
GSE70766
Distinct processes and transcriptional targets underlie CDX2 requirements in intestinal stem cells and differentiated villus cells
11 Ramesh Shivdasani Sep 15, 2015
GSE71713
Acquired tissue-specific promoter bivalency is a basis for PRC2 necessity in adult somatic cells
23 Ramesh Shivdasani May 20, 2016
GSE73398
Fixed tissue ChIP-Seq (FiT-Seq) of archived clinical samples reveals chromatin dynamics and tumor-specific enhancer profiles
109 Ramesh Shivdasani Apr 25, 2016
GSE83394
Dynamic Reorganization of Chromatin Accessibility Signatures during Dedifferentiation of Secretory Precursors into Lgr5+ Intestinal Stem Cells
49 Ramesh Shivdasani Jun 01, 2017
GSE97178
Hybrid stomach-intestinal chromatin states underlie human Barrett’s metaplasia
40 Ramesh Shivdasani Jun 03, 2021
GSE98724
Transcription factor-dependent ‘anti-repressive’ mammalian enhancers exclude H3K27me3 from extended genomic domains
47 Ramesh Shivdasani Jan 11, 2018
GSE99086
Retinoic Acid Related Receptor Orphan Receptor a (RORa) expressing T regulatory cells thwart type-2 cutaneous allergic inflammation
15 Ramesh Shivdasani Mar 26, 2018
GSE111024
Extensive recovery of embryonic enhancer and gene memory stored in hypomethylated enhancer DNA.
52 Ramesh Shivdasani Mar 14, 2019
GSE115541
Chromatin and tissue plasticity precede commitment to intestinal differentiation during endoderm development
74 Ramesh Shivdasani Oct 26, 2018
GSE128671
Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters
47 Ramesh Shivdasani Jan 17, 2020
GSE130681
Distinct mesenchymal cell populations generate the essential intestinal BMP signaling gradient
11 Ramesh Shivdasani Jan 17, 2020
GSE130822
Ascl2-dependent cell differentiation drives regeneration of abated intestinal stem cells
19 Ramesh Shivdasani Jan 17, 2020
GSE131265
Krüppel-like Factor 5 Regulates Stemness, Lineage Specification, and Regeneration of Intestinal Epithelial Stem Cells
5
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Ramesh Shivdasani Oct 27, 2021
GSE132379
Creb5 establishes the competence for Prg4 expression in articular cartilage
8 Ramesh Shivdasani Mar 16, 2021
GSE160264
Transcription factor-mediated intestinal metaplasia and the role of a shadow enhancer
44 Ramesh Shivdasani Feb 21, 2022
GSE183299
Cell and chromatin transitions in intestinal stem cell regeneration
22 Ramesh Shivdasani Jun 07, 2022
GSE184158
Birth and delineation of the intestinal stem cell niche
15 Ramesh Shivdasani Feb 08, 2023