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393 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					RESULTS
GSE194255	Transcriptomics analysis reveals the molecular mechanisms of the antibacterial activity of gallium nitrate against Acinetobacter baumannii isolated from bloodstream infections	Expression profiling by high throughput sequencing	Acinetobacter baumannii	6	RESULTS TXT	Changrui Qian	Jan 27, 2022
GSE171198	Repression of CHROMOMETHYLASE 3 Prevents Epigenetic Collateral Damage in Arabidopsis	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	35	RESULTS TSV SRA Run Selector	Michael D Nodine	Jun 01, 2021
GSE183264	Improved Super-Resolution Ribosome Profiling Reveals Prevalent Translation of Upstream ORFs and Small ORFs in Arabidopsis	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	12	RESULTS SRA Run Selector	Polly Hsu	Sep 20, 2023
GSE188493	Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	101	BW NARROWPEAK RESULTS TXT WIG SRA Run Selector	Zhenhui Zhong	Oct 27, 2022
GSE212801	MORC proteins regulate transcription factor binding through mediating chromatin compaction at active chromatin regions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	39	BW NARROWPEAK RESULTS	Zhenhui Zhong	Mar 27, 2023
GSE221679	The MOM1 complex recruits the RdDM machinery via MORC6 to establish de novo DNA methylation.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Arabidopsis thaliana	125	BW NARROWPEAK RESULTS TXT	Zhenhui Zhong	Jun 09, 2023
GSE227150	Light-induced LLPS of the CRY2/SPA1/FIO1 complex regulating mRNA methylation and chlorophyll homeostasis in Arabidopsis	Other Expression profiling by high throughput sequencing	Arabidopsis thaliana	88	BW RESULTS TXT	Zhenhui Zhong	Nov 30, 2023
GSE249737	High-throughput capture of transcription factor-driven chromatin dynamics using PHILO ChIP-seq (RNA-Seq)	Expression profiling by high throughput sequencing	Arabidopsis thaliana	10	RESULTS TXT	Mark Zander	Dec 02, 2024
GSE249738	High-throughput capture of transcription factor-driven chromatin dynamics using PHILO ChIP-seq	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Cannabis sativa Solanum lycopersicum	229	BW CSV RESULTS	Mark Zander	Dec 02, 2024
GSE276882	Transcriptomic analysis of gene expression pathways impacted by metaxin-2 (MTX-2) deficiency in a C. elegans mutant (mtx-2 KO, (gk444)) vs Wild-type worms (N2 Bristol)	Expression profiling by high throughput sequencing	Caenorhabditis elegans	6	RESULTS	Chloé Talarmin-Gas	Sep 13, 2024
GSE240783	Transcriptomic comparisons and allele specific expression reveals the electric signal duration divergence in radiative mormyrid electric fish evolution	Expression profiling by high throughput sequencing	Campylomormyrus compressirostris Campylomormyrus compressirostris x Campylomormyrus rhynchophorus Campylomormyrus compressirostris x Campylomormyrus tshokwe Campylomormyrus rhynchophorus Campylomormyrus tshokwe	45	RESULTS	Feng Cheng	Aug 31, 2023
GSE240784	Gene and allele specific expression during electric organ ontogeny in African weakly electric fish and hybrid	Expression profiling by high throughput sequencing	Campylomormyrus compressirostris Campylomormyrus compressirostris x Campylomormyrus rhynchophorus Campylomormyrus rhynchophorus	15	RESULTS	Feng Cheng	Aug 31, 2023
GSE173462	HOX epi-mutations, driven by maternal SMCHD1 or LRIF1 haploinsufficiency, trigger homeotic transformations in genetically wildtype offspring	Expression profiling by high throughput sequencing	Danio rerio	12	RESULTS SRA Run Selector	Shifeng Xue	May 25, 2022
GSE193591	Cell type specific transcriptome profiling reveals a role for thioredoxin in neutrophils and tumor initiation	Expression profiling by high throughput sequencing	Danio rerio	18	RESULTS XLSX	Colin Dewey	Feb 04, 2022
GSE202238	Alx function in the developing eye	Expression profiling by high throughput sequencing	Danio rerio	24	RESULTS TXT	Eric Liao	May 07, 2022
GSE207457	Transcriptome profiles of zebrafish larvae from a caffeine-induced anxiety model and a high fat-diet induced obesity model [RNA-Seq]	Expression profiling by high throughput sequencing	Danio rerio	12	RESULTS	Ari Meerson	Jul 19, 2023
GSE207550	Transcriptome profiles of zebrafish larvae from a caffeine-induced anxiety model and a high fat-diet induced obesity model	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Danio rerio	24	RESULTS	Ari Meerson	Jul 19, 2023
GSE237265	Infection induced inflammation impairs wound healing through IL-1b signaling	Expression profiling by high throughput sequencing	Danio rerio	9	RESULTS	Colin Dewey	Mar 25, 2024
GSE244291	Zebrafish reveal new roles for Fam83f in hatching and DNA damage-mediated autophagic responses	Expression profiling by high throughput sequencing	Danio rerio	54	RESULTS	Rebecca Ann Jones	Sep 30, 2024
GSE181611	Genetic and transcription profile analysis of tissue-specific anthocyanin pigmentation in carrot root phloem	Expression profiling by high throughput sequencing	Daucus carota	18	RESULTS SRA Run Selector	Florencia Bannoud	Oct 27, 2021