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3254 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					NARROWPEAK
GSE205254	β-catenin programs a tissue-specific epigenetic vulnerability in aggressive adrenocortical carcinoma (ATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BW NARROWPEAK	Antonio Marcondes Lerario	Apr 25, 2023
GSE249199	β-catenin and Hoxa9 preserve DNA replication dynamics, genomic integrity and stem cell functionality in a Prmt1-dependent manner [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	NARROWPEAK	Eric So	Feb 29, 2024
GSE235815	β-catenin and Hoxa9 preserve DNA replication dynamics, genomic integrity and stem cell functionality in a Prmt1-dependent manner [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	NARROWPEAK	Eric So	Feb 29, 2024
GSE235821	β-catenin and Hoxa9 preserve DNA replication dynamics, genomic integrity and stem cell functionality in a Prmt1-dependent manner	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	35	NARROWPEAK	Eric So	Feb 29, 2024
GSE150275	µATACseq: ATACseq with as few as 100 cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK SRA Run Selector	Neil Segil	Jul 09, 2021
GSE230275	yHSC AThi oHSC ATlo oHSC ATAC-Seq - Differences in Chromatin Accessibility in Autophagy engaging vs non-autophagy engaging old hematopoeitic stem cells (HSC) comapred to young HSC.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW CSV NARROWPEAK	Paul Vincent Dellorusso	May 15, 2024
GSE193052	the profiles of m6A modification in villous tissues with embryo damage	Expression profiling by high throughput sequencing	Homo sapiens	12	BED NARROWPEAK	Jiajie She	Aug 06, 2023
GSE122713	scRNA-seq, bulk RNA-seq, and ATAC-seq data from progenitor exhausted and terminally exhausted CD8+ T cells from tumors and chronic viral infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	NARROWPEAK	Kevin Bi	Nov 20, 2018
GSE194023	scNanoATAC-seq: Long-read Single-cell ATAC-seq by Oxford Nanopore Technologies Sequencing [DATASet2: bulkATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BW NARROWPEAK	Fuchou Tang	Sep 07, 2022
GSE194024	scNanoATAC-seq: Long-read Single-cell ATAC-seq by Oxford Nanopore Technologies Sequencing	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BED BW NARROWPEAK	Fuchou Tang	Sep 07, 2022
GSE123324	rDNA chromatin interactions in the MYC-driven Eμ-Myc transgenic mouse model of B-cell lymphoma [ChIP-seq UTF]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	NARROWPEAK SRA Run Selector	Jeannine Diesch	Feb 06, 2019
GSE70226	rDNA chromatin interactions in the MYC-driven Eµ-Myc transgenic mouse model of B-cell lymphoma	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	CSV NARROWPEAK TXT	Jeannine Diesch	Feb 06, 2019
GSE182133	p63 Directs Subtype Specific Gene Expression in HPV+ Head and Neck Squamous Cell Carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	25	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Satrajit Sinha	Apr 19, 2022
GSE164161	p53 wild-type colorectal cancer cells that express a fetal gene signature are associated with metastasis and poor prognosis	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BEDGRAPH BW NARROWPEAK SRA Run Selector	Lluis Espinosa	Apr 08, 2022
GSE236372	p53 rapidly restructures 3D chromatin organization to trigger a transcriptional response [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	BROADPEAK BW NARROWPEAK	Biola M Javierre	Apr 17, 2024
GSE235947	p53 rapidly restructures 3D chromatin organization to trigger a transcriptional response	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	54	BROADPEAK BW IBED NARROWPEAK TXT	Biola M Javierre	Apr 17, 2024
GSE169668	p53 pro-apoptotic activity is regulated by the G2/M promoting factor Cdk1 in response to DNA damage.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	NARROWPEAK SRA Run Selector	Juan J. Tena	Nov 26, 2021
GSE157950	p53 influences 5-FU-induced chromatin accessibility [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BW NARROWPEAK SRA Run Selector	Hyoung-Pyo Kim	Feb 10, 2021
GSE109292	p53 binding and gene expression profiles in Drosophila postmitotic and embryonic tissue	Expression profiling by high throughput sequencing	Drosophila melanogaster	12	BW NARROWPEAK TXT SRA Run Selector	John M Abrams	Jul 15, 2019
GSE51714	p53 activation effect on GM12878 lymphoblastoid cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	11	CEL CHP NARROWPEAK	Xuting Wang	Nov 14, 2014