GEO Browser - GEO

Series

Samples

Platforms

DataSets

228 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					BAM
GSE25840	Widespread RNA and DNA Sequence Differences in the Human Genome	Third-party reanalysis Expression profiling by high throughput sequencing	Homo sapiens		BAI BAM	Mingyao Li	May 19, 2011
GSE29423	Transcriptome analysis of light-utilizing Strain IMCC1322, a member of SAR116 group bacteria	Expression profiling by high throughput sequencing	Candidatus Puniceispirillum marinum IMCC1322	6	BAI BAM SRA Run Selector	Hyun-Myung Oh	May 01, 2020
GSE31206	Colistin-resistant, lipopolysaccharide-deficient Acinetobacter baumannii responds to lipopolysaccharide loss through increased expression of genes involved in the synthesis and transport of lipoproteins, phospholipids and poly-beta-1,6-N-acetylglucosamine	Expression profiling by high throughput sequencing	Acinetobacter baumannii	4	BAI BAM TXT SRA Run Selector	Paul Francis Harrison	Aug 11, 2011
GSE33480	RNA-seq from ENCODE/Caltech	Expression profiling by high throughput sequencing	Homo sapiens	24	BAI BAM BIGBED BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Jul 12, 2012
GSE33838	DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BAI BAM BEDGRAPH CSV SRA Run Selector	Stephen Tapscott	Jan 03, 2012
GSE65191	Nucleosome locations in human oral keratinocytes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BAI BAM SRA Run Selector	Guy Lyons	Dec 31, 2017
GSE103693	The Identification and Characterization of Sindbis Virus RNA:Host Protein Interactions	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BAI BAM XLSX SRA Run Selector	Kevin J Sokoloski	Jan 02, 2018
GSE109874	Histone methyltransferase PRDM9 is not essential for meiosis in male mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BAI BAM BEDGRAPH SRA Run Selector	Kevin Brick	Jun 07, 2019
GSE125053	High-resolution analysis of chromatin structure by Mnase-SSP	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BAI BAM SRA Run Selector	Vijay Ramani	Feb 12, 2019
GSE147440	Identification of m6A residues at single nucleotide resolution using eCLIP and an accessible custom analysis pipeline	Expression profiling by high throughput sequencing	Homo sapiens	17	BAI BAM BED XLS SRA Run Selector	Justin Roberts	Dec 31, 2020
GSE160387	STAG proteins mediate heterochromatin organization to support translation and cell identity [Iso-Seq]	Other	Mus musculus	1	BAI BAM SRA Run Selector	Suzana Hadjur	Jun 06, 2021
GSE160390	PEZIC_STAG1_Pluripotency	Expression profiling by high throughput sequencing Other	Mus musculus	33	BAI BAM TXT	Suzana Hadjur	Jun 06, 2021
GSE209747	Identification and Characterization of a MAPT-targeting Locked Nucleic Acid Antisense Oligonucleotide Therapeutic for Tauopathies III	Expression profiling by high throughput sequencing	Homo sapiens	1	BAI BAM	Amy Easton	Aug 07, 2022
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE17593	Melanoma short-term cultures and cell lines: expression profiling and CNV analyses	Expression profiling by array Genome variation profiling by SNP array Expression profiling by high throughput sequencing	Homo sapiens	41	BAM CEL	Michael Berger	Feb 01, 2010
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE19409	Ligand-dependent dynamics of retinoic acid receptor binding during early neurogenesis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BAM TXT SRA Run Selector	Shaun Mahony	Dec 10, 2010
GSE19450	Rapid and synchronous clearance of PcG histone modifications from Hox genes anticipates motor neuron differentiation	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Mus musculus	33	BAM TXT	Shaun Mahony	Dec 13, 2012