GEO Browser - GEO

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57 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter						Weiguo Cui
GSE149796	CUT&Tag ChIP-seq analysis of BATF in CX3CR1+ effector , CX3CR1- Ly108- exhausted, or Ly108+ progenitor CD8 T cells during chronic viral infection.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BIGWIG SRA Run Selector	Weiguo Cui	Jun 02, 2021
GSE149810	Genome-wide maps of histone modifications in CX3CR1+ effector , CX3CR1- Ly108- exhausted, or Ly108+ progenitor CD8 T cells during chronic viral infection.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BIGWIG SRA Run Selector	Weiguo Cui	May 22, 2021
GSE149849	ChIP-seq analysis of BATF in ILC2s sorted from lungs at day 9 after influenza virus infection	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BIGWIG SRA Run Selector	Weiguo Cui	Jan 14, 2022
GSE168079	ChIP-seq analysis of BATF in ILC3s sorted from small intestine of Rag1-/- mice [CUT&TAG ChIPseq]	Other	Mus musculus	5	BIGWIG SRA Run Selector	Weiguo Cui	Aug 31, 2022
GSE168080	BATF is a promising candidate to maintain ILC3s stability and to coordinate ILC3s-meditaed control of intestinal homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	21	BIGWIG BW MTX TSV	Weiguo Cui	Aug 31, 2022
GSE188275	Chromatin accessibility landscapes of WT (GFP-) and BATF KO (GFP+) ILC3s sorted from lung mature ILC2s	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BIGWIG SRA Run Selector	Weiguo Cui	Jan 14, 2022
GSE212590	Chromatin accessibility landscapes of intestinal WT Nkp46-CC6- ILC3 (Double Negative, DN ILC3) and BATF-deficient cKO DN ILC3s sorted from intestine	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BIGWIG	Weiguo Cui	Sep 08, 2022
GSE222347	Loss of PBAF Promotes Effector Differentiation and Limits CD8+ T Cell Exhaustion in Chronic Viral Infection and Cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	6	BIGWIG BROADPEAK H5 TSV	Weiguo Cui	Jun 24, 2023
GSE142342	ATAC-seq of MIG, MIG-E47, or MIG-ID2 transduced CD8 T cells in vitro	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Weiguo Cui	Apr 02, 2021
GSE142344	MIG, MIG-E47, or MIG-ID2 transduced CD8 T cells in vitro	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	12	BW	Weiguo Cui	Apr 02, 2021
GSE149752	Chromatin accessibility landscapes of CX3CR1+ effector , CX3CR1- Ly108- exhausted, or Ly108+ progenitor CD8 T cells during chronic viral infection.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Weiguo Cui	May 22, 2021
GSE149847	Chromatin accessibility landscapes of WT and Batf-/- ILC2s sorted from lungs at day 9 after influenza virus infection	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Weiguo Cui	Jan 14, 2022
GSE149854	Bulk RNA sequencing of WT and Batf-/- ILC2s sorted from lungs at day 9 after influenza virus infection	Expression profiling by high throughput sequencing	Mus musculus	6	BW CSV XLSX SRA Run Selector	Weiguo Cui	Jan 14, 2022
GSE150438	ATAC-seq of P14 CD8 T cells during acute LCMV infection	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW SRA Run Selector	Weiguo Cui	Apr 02, 2021
GSE150440	H3K27Ac ChIP-seq of P14 CD8 T cells during acute LCMV infection	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW SRA Run Selector	Weiguo Cui	Apr 02, 2021
GSE150442	P14 CD8 T cells during acute LCMV infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	27	BW	Weiguo Cui	Apr 02, 2021
GSE168078	Chromatin accessibility landscapes of WT (Rag1-/-) and BATF KO (Rag1-/-Batf-/-) ILC3s sorted from small intestine [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Weiguo Cui	Aug 31, 2022
GSE193932	ATAC-sequencing of Th1, Tfh, and memory-like splenic CD4+ T cells on day 14 post LCMV Cl13 infection	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW	Weiguo Cui	Feb 25, 2022
GSE158896	Single-cell lineage mapping of a diverse virus-specific naïve CD4 T cell repertoire	Expression profiling by high throughput sequencing	Mus musculus	10	CSV MTX TSV SRA Run Selector	Weiguo Cui	Nov 10, 2020
GSE168076	Bulk RNA sequencing of WT (Batf fl/fl) and Batf-/- (Batf fl/fl PLZFcre+) ILC3s sorted from small intestine [bulk RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	6	CSV SRA Run Selector	Weiguo Cui	Aug 31, 2022