GEO Browser - GEO

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24 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter						Andrew P Hutchins
GSE31529	Genome-wide binding of STAT3 in peritoneal macrophages	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BOWTIE SRA Run Selector	Andrew P Hutchins	Feb 13, 2012
GSE31530	Transcriptome changes in IL-10 treated peritoneal macrophages	Expression profiling by high throughput sequencing	Mus musculus	2	BED SAM SRA Run Selector	Andrew P Hutchins	Feb 13, 2012
GSE31531	Genome-wide analysis of STAT3-binding and gene expression changes in peritoneal macrophages upon interleukin-10 stimulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BOWTIE SAM	Andrew P Hutchins	Feb 13, 2012
GSE34170	Dual knockdown of Esrrb and Sox2 in mouse embryonic stem cells	Expression profiling by array	Mus musculus	4	TXT	Andrew P Hutchins	Nov 22, 2012
GSE34550	Systematic RNA-seq analysis of the early events of CD4+ T cell activation	Expression profiling by high throughput sequencing	Mus musculus	2	BED SRA Run Selector	Andrew P Hutchins	Aug 08, 2012
GSE49449	RNA-seq analysis of IL-10 treatment of wildtype and Ptpn1-/- knockout peritoneal macrophages	Expression profiling by high throughput sequencing	Mus musculus	8	TSV SRA Run Selector	Andrew P Hutchins	May 12, 2014
GSE55385	Systematic analysis of the pro and anti-inflammatory activation of mouse myeloid cells	Expression profiling by high throughput sequencing	Mus musculus	37	TSV SRA Run Selector	Andrew P Hutchins	Mar 24, 2015
GSE57967	LincRNA-p21 Blocks Somatic Cell Reprogramming by Sustaining H3K9me3 and CpG Methylation at Pluripotent Gene Promoters	Expression profiling by high throughput sequencing	Mus musculus	9	TSV SRA Run Selector	Andrew P Hutchins	Dec 29, 2014
GSE70736	NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED BW SRA Run Selector	Andrew P Hutchins	Mar 07, 2018
GSE70738	NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Andrew P Hutchins	Mar 07, 2018
GSE70740	NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BED BW	Andrew P Hutchins	Mar 07, 2018
GSE70741	Differentiation of human embryonic stem cells towards hepatocytes	Expression profiling by high throughput sequencing	Homo sapiens	10	TSV SRA Run Selector	Andrew P Hutchins	Apr 28, 2017
GSE74997	Role of the histone demethylase Kdm6b/Jmjd3 in somatic cell reprogramming [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BW SRA Run Selector	Andrew P Hutchins	Jul 22, 2020
GSE74998	Role of the histone demethylase Kdm6b/Jmjd3 in somatic cell reprogramming [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	29	TSV SRA Run Selector	Andrew P Hutchins	Jul 22, 2020
GSE75005	Role of the histone demethylase Kdm6b/Jmjd3 in somatic cell reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57	BED BW	Andrew P Hutchins	Jul 22, 2020
GSE76823	DDX5-deficiency affects cell fate decisions by regulating lineage specific genes and polycomb repressive complexes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED BW SRA Run Selector	Andrew P Hutchins	Jan 22, 2017
GSE76824	DDX5-deficient affect cell fate decision by regulating lineage specific genes and polycomb repressive complexes [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	6	TSV SRA Run Selector	Andrew P Hutchins	Jan 22, 2017
GSE76825	DDX5-deficiency affects cell fate decisions by regulating lineage specific genes and polycomb repressive complexes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	17	BED BW	Andrew P Hutchins	Jan 22, 2017
GSE89690	DDX5-deficient affect cell fate decision by regulating lineage specific genes and polycomb repressive complexes [miRNA-seq]	Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	TSV SRA Run Selector	Andrew P Hutchins	Jan 22, 2017
GSE137627	Analysis of transposable element expression in mouse ESCs with and without Ncor1, and a time course RNA-seq of mouse ESC differentiation to EpiLCs	Expression profiling by high throughput sequencing	Mus musculus	16	TSV SRA Run Selector	Andrew P Hutchins	Jul 22, 2020