GEO Browser - GEO

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48 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter						Christopher Benner
GSE21512	Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52	BED FA TXT SRA Run Selector	Christopher Benner	May 27, 2010
GSE21978	A global network of transcription factors, involving E2A, EBF1 and FOXO1, that orchestrates the B cell fate	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BED FA TXT SRA Run Selector	Christopher Benner	Jun 13, 2010
GSE23620	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes (Agilent expression data)	Expression profiling by array	Mus musculus	24	TXT	Christopher Benner	Jan 01, 2011
GSE23621	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes (Illumina expression data)	Expression profiling by array	Mus musculus	8	TXT	Christopher Benner	Jan 01, 2011
GSE23622	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	55	BED FA TXT	Christopher Benner	Jan 01, 2011
GSE27682	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells [gene expression]	Expression profiling by array	Homo sapiens	12	TXT	Christopher Benner	May 15, 2011
GSE27824	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BED BEDGRAPH FA	Christopher Benner	May 15, 2011
GSE54964	Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [Affymetrix]	Expression profiling by array	Homo sapiens	6	CEL	Christopher Benner	May 15, 2015
GSE54969	Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development	Expression profiling by array Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	20	CEL	Christopher Benner	May 15, 2015
GSE60523	An alternative pluripotent state confers interspecies chimaeric competency [Microarray]	Expression profiling by array	Mus musculus	12	CEL	Christopher Benner	May 06, 2015
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE23619	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes (Illumina sequencing data)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BED FA TXT SRA Run Selector	Christopher Benner	Jan 01, 2011
GSE27823	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells [ChIP-Seq, Gro-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	30	BED BEDGRAPH FA SRA Run Selector	Christopher Benner	May 15, 2011
GSE40173	Global changes in the nuclear positioning of chromatin domains and genomic interactions that orchestrate B cell fate	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	19	BED BEDGRAPH TXT SRA Run Selector	Christopher Benner	Oct 09, 2012
GSE47626	Differential LINE-1 retrotransposition in induced pluripotent stem cells between humans and great apes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Pan paniscus Pan troglodytes	18	TXT SRA Run Selector	Christopher Benner	Oct 23, 2013
GSE54443	Mutant Huntingtin promotes neuronal death through cell autonomous microglial activation via myeloid lineage- determining factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BED TXT SRA Run Selector	Christopher Benner	Mar 02, 2014
GSE54968	Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	6	TXT SRA Run Selector	Christopher Benner	May 15, 2015
GSE57272	Conserved non-coding sequence 2 (CNS2) of the Foxp3 genomic locus is essential for the function and stability of regulatory T cells during their activation	Expression profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Christopher Benner	Sep 04, 2014
GSE60603	An alternative pluripotent state confers interspecies chimaeric competency [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	14	TXT SRA Run Selector	Christopher Benner	May 06, 2015
GSE60857	Coordinate Regulation of Enhancer Transcription at Super-Enhancers	Expression profiling by high throughput sequencing Other	Mus musculus	8	TXT SRA Run Selector	Christopher Benner	Dec 25, 2014