3582 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE168876
Spiny mice (Acomys cahirinus) activate unique transcriptional programs after severe kidney injuries and regenerate organ function without fibrosis
18 Daryl Okamura Sep 13, 2021
GSE182141
A subset of pro-inflammatory spiny mice macrophages promotes a regenerative phenotype in mouse fibroblasts
10 Steve Potter Oct 23, 2023
GSE186346
Extensive sex differences in depression-linked variants functionally assayed in mouse brain [Hippocampus]
25 Joseph Dougherty Feb 10, 2023
GSE186347
Extensive sex differences in depression-linked variants functionally assayed in mouse brain [P0&P10]
44 Joseph Dougherty Feb 10, 2023
GSE182553
HDAC1/2 is indispensable for mouse and bovine ZGA via regulating distribution of H3K27ac and H3K4me3 [RNA-seq]
26 Kun Zhang May 21, 2022
GSE151761
Innovations in primate interneuron repertoire
123 Fenna Marie Krienen Jun 04, 2020
GSE161645
scAAVengr, a transcriptome-based pipeline for quantitative ranking of engineered AAVs with single-cell resolution
147 Leah Byrne Oct 19, 2021
GSE184893
RNA m6A methylome from zebrafish zygotes, mouse liver polyA-selected RNAs, mouse embryonic stem cells, spike-in RNA controls, and single mouse oocytes and embryos
52 Kin Fai Au May 05, 2023
GSE186158
Single-cell transcriptomic atlas reveals the evolution of immune cells and molecules across multiple vertebrate species
7 Cangang Zhang Jan 30, 2023
GSE192740
Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches (single cells)
132 Liesbet Martens Jan 11, 2022
GSE110061
Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution
76 Youzhi Cheng Aug 22, 2020
GSE118785
H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes
43 Jacek Majewski Aug 30, 2019
GSE147879
Two competing mechanisms of DNMT3A recruitment regulate the dynamics of de novo DNA methylation at CpG islands
78 Jacek Majewski May 13, 2021
GSE166155
KARR-seq reveals principles of high-order ribonucleoprotein structure assembly
67 Youzhi Cheng Dec 06, 2023
GSE155677
Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler
36 Boyan Bonev Jan 27, 2022
GSE167518
Transcriptional-Regulatory Convergence Across Functional MDD Risk Variants Identified by Massively Parallel Reporter Assays [Expt2]
13 Joseph Dougherty Jun 30, 2021
GSE211736
Joint epigenome profiling reveals cell-type-specific gene regulatory programs in human cortical organoids
27 Boyan Bonev Aug 23, 2023
GSE160471
Single nucleus RNAseq of cerebellar nucleus neurons in three species
3 Justus M Kebschull Oct 30, 2020
GSE160653
The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [ATAC-seq]
3 Giuliano Crispatzu Dec 31, 2020
GSE160654
The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [ChIP-seq]
12 Giuliano Crispatzu Dec 31, 2020