GEO Browser - GEO

Series

Samples

Platforms

DataSets

32 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247				MCOOL
GSE183806	Chromatin architecture of B cell development during the humoral immune response	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	107	BIGWIG BW MCOOL NARROWPEAK SF	Ashley Stephen Doane	Sep 09, 2021
GSE206131	RNA polymerase II and PARP1 shape enhancer-promoter contacts [Micro-C]	Other	Homo sapiens Mus musculus	51	MCOOL TXT SRA Run Selector	Charles Grahe Danko	Jun 18, 2022
GSE207225	Ultra-deep 3D genome structure mapping with Region Capture Micro-C	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	18	BW MCOOL	Viraat Y Goel	Jul 12, 2022
GSE256225	Putative looping factor ZNF143/ZFP143 is an essential transcriptional regulator with no looping function [Micro-C]	Other	Homo sapiens Mus musculus	32	MCOOL	Domenic Narducci	Mar 07, 2024
GSE256246	Putative looping factor ZNF143/ZFP143 is an essential transcriptional regulator with no looping function.	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	132	BEDGRAPH BW MCOOL	Domenic Narducci	Mar 07, 2024
GSE131784	Spen regulates X chromosome inactivation	Expression profiling by high throughput sequencing Other	Mus musculus	73	BW MCOOL TXT	samuel Collombet	Dec 08, 2019
GSE161817	DNA replication timing directly regulates the frequency of oncogenic chromosomal translocations [HiC]	Other	Mus musculus	11	BED BW MCOOL SRA Run Selector	Tobias Neumann	Sep 15, 2022
GSE162617	Transcription Factors Recruit the Cohesin Loader NIPBL to Promote Chromatin Looping and Long-range Gene Regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	11	HIC MCOOL SRA Run Selector	Gordon Hager	Jun 01, 2021
GSE178345	TCF-1 mediates 3D genome reconfiguration during T cell development (HiC)	Other	Mus musculus	5	HIC MCOOL SRA Run Selector	Wenliang Wang	Feb 24, 2022
GSE178348	TCF-1 mediates 3D genome reconfiguration during T cell development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	40	BED BW HIC MCOOL TXT	Wenliang Wang	Feb 24, 2022
GSE178982	Enhancer-promoter interactions and transcription are maintained upon acute loss of CTCF, cohesin, WAPL, and YY1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	173	BW MCOOL SRA Run Selector	Xavier Darzacq	Jul 15, 2021
GSE184129	Nucleome programming is required for the foundation of totipotency in mammalian germline development [Hi-C]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BW FANC MCOOL SRA Run Selector	Yukihiro Yabuta	Jun 15, 2022
GSE186893	STAG2 promotes the myelination transcriptional program in oligodendrocytes [Hi-C]	Other	Mus musculus	4	BEDGRAPH BEDPE HIC MCOOL SRA Run Selector	Hongtao Yu	Aug 23, 2022
GSE190894	Synthetic genomic reconstitution reveals principles of mammalian Hox cluster regulation [Hi-C]	Other	Mus musculus	4	MCOOL	Sudarshan Pinglay	Dec 16, 2021
GSE191312	multi-omic analysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW CSV MCOOL MTX TSV	John James Tello-Cajiao	Apr 01, 2022
GSE198181	A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination [Micro-C]	Expression profiling by high throughput sequencing	Mus musculus	2	MCOOL	Maximilian Christian von der Linde	Jan 20, 2023
GSE198182	A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	69	BW MCOOL TAB	Maximilian Christian von der Linde	Jan 20, 2023
GSE201852	TF co-binding to nucleosome arrays	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	116	BW MCOOL	Abdenour Soufi	Sep 27, 2024
GSE210289	Igh and Igk loci use different folding principles for V gene recombination due to distinct chromosomal architectures of pro-B and pre-B cells	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36	BED BEDGRAPH HIC MCOOL TXT	Meinrad Busslinger	Jan 15, 2023
GSE213501	Enhancer Cis Elements Instruct Promoter-Enhancer Interaction, Promoter-Enhancer Insulation and Compartmental Segregation	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	30	BIGWIG HIC MCOOL	Hanbin Lu	Dec 31, 2023