123 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE212252
Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition
80 Luca Massimino Sep 12, 2022
GSE110061
Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution
76 Youzhi Cheng Aug 22, 2020
GSE185768
Promoter repression and 3D-restructuring resolves divergent developmental gene expression in TADs [Hi-C]
6 Michael I Robson Sep 29, 2022
GSE185775
Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes
88 Michael I Robson Sep 29, 2022
GSE162511
Single-cell transcriptome and 3D genome atlas of the developing mouse brain
4314 Longzhi Tan Jan 07, 2021
GSE169121
Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology.
61 Nadine Fournier Jan 21, 2022
GSE176066
NicE-C efficiently reveals open chromatin associated chromosome interactions at high resolution
32 Zhengyu Luo Jan 18, 2022
GSE183934
Perturbation of TET2 condensation induces genome-wide promiscuous DNA hypomethylation and curtails leukemia cell growth
50 Jia Li Jun 16, 2024
GSE211176
The hyperconnected 3D clique at the Ets1 locus is required for T cell function (Hi-C)
3
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Golnaz Vahedi Jun 20, 2023
GSE211178
The hyperconnected 3D clique at the Ets1 locus is required for T cell function
65 Golnaz Vahedi Jun 20, 2023
GSE213597
ETV6 Represses Inflammatory Response Genes and Regulates HSPC Function During Stress Hematopoiesis in Mice
27 Kim Nichols Aug 24, 2023
GSE214692
Dissecting developmental disorders caused by CTCF mutation at R567
71 gongcheng Hu May 05, 2024
GSE218274
PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity
75 Hongjian Jin Sep 29, 2023
GSE232490
A multiscale 3D chromatin architecture that controls development of the humoral immune system is assembled by IKAROS
120 Katia Georgopoulos Nov 20, 2023
GSE120393
Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development
107 Chia-Lin Wei Jan 07, 2020
GSE123653
CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming [BL-Hi-C]
40 ya wei song Apr 05, 2022
GSE123670
CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming
187 ya wei song Apr 05, 2022
GSE125595
RNA interactions are essential for proper CTCF function
24 Ricardo Saldana-Meyer Sep 12, 2019
GSE125656
Exonuclease combinations reduce noises in 3D genomics technologies
27 Qing Li Apr 08, 2020
GSE125972
A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)
38 Sylvia C Hewitt May 08, 2019