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1619 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247				BW
GSE173497	Oncofetal gene reactivation drives EZH2-mutant myeloid leukemia pathogenesis	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	59	BW CEL	Dorit Borchert	Apr 30, 2023
GSE228968	Phosphorylated nuclear DICER1 promotes open chromatin state and gastric cell fate in lung adenocarcinomas	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BW MTX RCC TSV	Raisa Reyes-Castro	Aug 08, 2023
GSE75005	Role of the histone demethylase Kdm6b/Jmjd3 in somatic cell reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57	BED BW	Andrew P Hutchins	Jul 22, 2020
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE98101	Spatial-temporal epigenetic landscape of mouse gastrula	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	120	BW TAGALIGN TXT XLS SRA Run Selector	Naihe Jing	Oct 07, 2019
GSE108963	Single-cell transcriptomic analysis reveals lineage hierarcies and communications for second heart lineage deployment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BW TXT	Haiqing Xiong	Jun 22, 2019
GSE109566	Transcriptome analysis of differentiated normal mouse urothelial organoids reveals novel pathways activated during urothelial differentiation	Expression profiling by high throughput sequencing	Mus musculus	6	BW TXT SRA Run Selector	Enrique Carrillo de Santa Pau	Aug 06, 2019
GSE112561	Genomic classification and identification of the cell of origin of pediatric mixed phenotype acute leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BW	Beisi Xu	Oct 18, 2018
GSE117529	RNA/WES/ATAC/scRNA sequencing of murine melanoma primary and LN metastases	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	58	BW MTX TSV TXT SRA Run Selector	Nathan Edward Reticker-Flynn	Jun 14, 2021
GSE118785	H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	43	BW TDF SRA Run Selector	Carmen Rivas	Aug 30, 2019
GSE122589	Transcription factor activity and nucleosome organisation in mitosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	97	BW TSV SRA Run Selector	Pablo Navarro	Dec 04, 2018
GSE123670	CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	187	BED BW HIC	ya wei song	Apr 05, 2022
GSE123692	β-catenin safeguards the ground state of pluripotency by strengthening the robustness of the transcriptional apparatus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BW TXT	Yiwei Lai	Jul 01, 2020
GSE124517	Regulation of neuronal commitment in mouse embryonic stem cells by the Reno/Bahcc1 locus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	77	BW NARROWPEAK TXT SRA Run Selector	Igor Ulitsky	Sep 13, 2020
GSE124540	ChIP-seq and RNA-seq analysis of histone Kcr in the embryonic forebrain and neural stem/progenitor cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BED BW TXT SRA Run Selector	Dai Shang Kun	Jun 22, 2021
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE125595	RNA interactions are essential for proper CTCF function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24	BW CLOUPE HIC TXT SRA Run Selector	Ricardo Saldana-Meyer	Sep 12, 2019
GSE125696	REV-ERBa and REV-ERBb function as key factors regulating Mammalian Circadian Output	Expression profiling by high throughput sequencing	Mus musculus	24	BW TXT SRA Run Selector	Kazuhiro Yagita	Jul 29, 2019
GSE127790	Nuclear exosome targeting complex core factor Zcchc8 regulates the degradation of LINE1 RNA in early embryos and embryonic stem cells	Expression profiling by high throughput sequencing	Mus musculus	59	BW FPKM_TRACKING TXT SRA Run Selector	You Wu	Nov 07, 2019
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BW MTX TSV TXT SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020