GEO Browser - GEO

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244 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247				BEDGRAPH
GSE108770	Hypoxia-induced priming of microglial inflammatory gene expression is associated with TLR4 signaling H3K4me3 enrichment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH DIFF TDF SRA Run Selector	Jyoti Watters	Feb 04, 2020
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE128000	AMPK links acetyl-coA homeostasis to BET recruitment in acute myeloid leukemia: ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BEDGRAPH SRA Run Selector	Daisuke Nakada	Sep 05, 2019
GSE128001	AMPK links acetyl-coA homeostasis to BET recruitment in acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BEDGRAPH	Daisuke Nakada	Sep 05, 2019
GSE128535	Histone 3 K9 and K27 acetylation of enhancers in response to thyroid hormone	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	BED BEDGRAPH TXT SRA Run Selector	Lars Grøntved	Jul 01, 2019
GSE130119	MAFG-driven astrocytes promote CNS inflammation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	163	BEDGRAPH CSV TXT	Michael Wheeler	Feb 12, 2020
GSE130696	H4K20me3 methyltransferase SUV420H2 shapes the three-dimensional chromatin landscape of pluripotent embryonic stem cells [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH TXT SRA Run Selector	Benjamin L Kidder	Nov 13, 2020
GSE130725	H4K20me3 methyltransferase SUV420H2 shapes the three-dimensional chromatin landscape of pluripotent embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	26	BEDGRAPH HIC TXT	Benjamin L Kidder	Nov 13, 2020
GSE134901	Nutrient regulation of the islet epigenome controls adaptive insulin secretion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus Mus musculus	131	BEDGRAPH DIFF TXT SRA Run Selector	Matthew Wortham	Feb 24, 2023
GSE135225	Oct4-mediated inhibition of Lsd1 activity promotes the active and primed state of pluripotency enhancers [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH XLSX SRA Run Selector	Humaira Gowher	Jun 29, 2020
GSE135226	Oct4-mediated inhibition of Lsd1 activity promotes the active and primed state of pluripotency enhancers [methylRAD-seq]	Methylation profiling by high throughput sequencing	Mus musculus	2	BEDGRAPH TSV SRA Run Selector	Humaira Gowher	Jun 29, 2020
GSE135227	Oct4-mediated inhibition of Lsd1 activity promotes the active and primed state of pluripotency enhancers	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH TSV XLSX	Humaira Gowher	Jun 29, 2020
GSE135808	Topoisomerase 1 Nicking-dependent HP1gamma Engagement Mediates Acute Activation of Phase-separated Enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	167	BED BEDGRAPH BIGWIG	Yuliang Tan	Aug 04, 2022
GSE136844	LINE-1 promoter methylation analysis in brain development	Methylation profiling by high throughput sequencing	Mus musculus	120	BEDGRAPH SRA Run Selector	Beatrice Bodega	Jan 17, 2021
GSE137050	The comparative roadmaps of reprogramming and transformation unveiled that cellular plasticity is broadly controlled by Bcl11b and Atoh8	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	59	BEDGRAPH MTX TSV TXT XLS	Fabrice Lavial	May 06, 2022
GSE140363	Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	122	BED BEDGRAPH BROADPEAK BW CSV HIC NARROWPEAK SRA Run Selector	Nishana Mayilaadumveettil	Apr 14, 2020
GSE140611	Dichotomous Engagement of HDAC3 Activity Governs Inflammatory Responses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	273	BEDGRAPH BIGWIG TDF	Hoang Nguyen	Apr 30, 2020
GSE141635	Histone modifications in lung epithelial cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BEDGRAPH SRA Run Selector	Yoshihiko Kobayashi	Jun 02, 2020
GSE142772	p53 activates the long noncoding RNA Pvt1b to inhibit Myc and suppress tumorigenesis	Expression profiling by high throughput sequencing	Mus musculus	19	BEDGRAPH SRA Run Selector	Matthew Simon	Jan 20, 2020
GSE143204	p53 activates the long noncoding RNA Pvt1b to inhibit Myc and suppress tumorigenesis	Expression profiling by high throughput sequencing	Mus musculus	31	BEDGRAPH	Nadya Dimitrova	Jan 20, 2020