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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247					Beisi Xu
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE108116	UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	BED TXT	Beisi Xu	Feb 15, 2019
GSE112558	RNA-sequencing to investigate transcriptional changes caused by ZNF384 fusion proteins in murine pre-B cells	Expression profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Beisi Xu	Oct 18, 2018
GSE112561	Genomic classification and identification of the cell of origin of pediatric mixed phenotype acute leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BW	Beisi Xu	Oct 18, 2018
GSE120333	UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells [mouse RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Beisi Xu	Feb 15, 2019
GSE135465	Nucleome Dynamics during Retinal Development[Hi-C_Mm]	Other	Mus musculus	11	HIC SRA Run Selector	Beisi Xu	Sep 05, 2019
GSE137778	Ybx1 negatively regulates PRC2 to affect gene expression programs for neural lineage specification and neural progenitor self-renewal and differentiation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BW SRA Run Selector	Beisi Xu	Jun 16, 2020
GSE137853	Ybx1 negatively regulates PRC2 to affect gene expression programs for neural lineage specification and neural progenitor self-renewal and differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BW TXT	Beisi Xu	Jun 16, 2020
GSE146209	Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW SRA Run Selector	Beisi Xu	Dec 14, 2021
GSE146250	Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	78	BED BW TSV	Beisi Xu	Dec 14, 2021
GSE146442	Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation [ChIP,CutRun]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BW SRA Run Selector	Beisi Xu	Dec 14, 2021
GSE149672	Dynamic Foxp3-chromatin interaction controls tunable Treg cell function [PSI-ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Beisi Xu	May 28, 2024
GSE149674	Dynamic Foxp3-chromatin interaction controls tunable Treg cell function	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	94	BW TXT	Beisi Xu	May 28, 2024
GSE149693	Dynamic Foxp3-chromatin interaction controls tunable Treg cell function [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	16	TXT SRA Run Selector	Beisi Xu	May 28, 2024
GSE158105	Foxp3 enhancers synergize to maximize regulatory T cell suppressive capacity [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BW SRA Run Selector	Beisi Xu	May 10, 2021
GSE158107	Foxp3 enhancers synergize to maximize regulatory T cell suppressive capacity [Cut&Run]	Other	Mus musculus	12	BW SRA Run Selector	Beisi Xu	May 10, 2021
GSE158222	Foxp3 enhancers synergize to maximize regulatory T cell suppressive capacity [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	8	BW SRA Run Selector	Beisi Xu	May 10, 2021
GSE158223	Foxp3 enhancers synergize to maximize regulatory T cell suppressive capacity	Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	60	BW TXT	Beisi Xu	May 10, 2021
GSE162805	Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation [SLAM-Seq]	Expression profiling by high throughput sequencing	Mus musculus	8	TSV SRA Run Selector	Beisi Xu	Dec 14, 2021
GSE164117	A distal Foxp3 enhancer enables interleukin-2 dependent thymic Treg cell lineage commitment for robust immune tolerance[TCR-seq]	Other	Mus musculus	10	TXT SRA Run Selector	Beisi Xu	Mar 16, 2021