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1618 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057				TSV
GSE116502	A conserved odor detection pathway via modulation of chromatin and cellular gene expression	Expression profiling by high throughput sequencing	Arabidopsis thaliana Drosophila melanogaster Mus musculus	34	TSV SRA Run Selector	Christi Ann Scott	Jul 28, 2020
GSE163549	TENT5 cytoplasmic non-canonical poly(A) polymerases regulate the innate immune response in animals	Expression profiling by high throughput sequencing	Caenorhabditis elegans Mus musculus	18	TSV SRA Run Selector	Andrzej Dziembowski	Oct 01, 2022
GSE229169	Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus	46	MTX TSV	Bing Ren	Oct 31, 2023
GSE199431	Position-dependent function of human sequence-specific transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Chlorocebus sabaeus Homo sapiens Mus musculus	56	BED FA TSV TXT	Christopher Benner	Apr 26, 2024
GSE85755	Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations	Expression profiling by high throughput sequencing	Danio rerio Mus musculus	21	CSV FA TSV TXT SRA Run Selector	Susanne C van den Brink	Sep 28, 2017
GSE184036	Single-cell profiling of histone modifications and transcription in developmental systems with EpiDamID	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	155	BEDGRAPH BROADPEAK HDF5 NARROWPEAK TSV	Jop Kind	Apr 01, 2022
GSE202880	Labelling transcriptional response to dissociation using SLAMseq	Expression profiling by high throughput sequencing	Danio rerio Mus musculus	26	TSV TXT	Anika Neuschulz	Dec 20, 2022
GSE202949	Measuring stress response upon tissue dissociation using SLAMseq in bulk and single cells	Expression profiling by high throughput sequencing Other	Danio rerio Mus musculus	30	MTX TSV TXT	Anika Neuschulz	Dec 20, 2022
GSE241159	Interspecies comparison reveals Hmga1 as driver of cardiac regeneration	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Mus musculus	42	BW CSV TSV	Mara Bouwman	Nov 15, 2024
GSE118814	MicroRNA-7 regulates the plasticity of the enteroendocrine lineage	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	49	CSV MTX TSV SRA Run Selector	Praveen Sethupathy	Feb 24, 2020
GSE188639	A single-cell massively parallel reporter assay detects cell type specific cis-regulatory activity	Expression profiling by high throughput sequencing Other	Escherichia coli Homo sapiens Mus musculus	19	CSV MTX TSV	SIQI ZHAO	Nov 11, 2021
GSE128818	Aberrant phase separation of transcription factors in human developmental disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Gallus gallus Mus musculus	19	BED BW MTX TSV SRA Run Selector	Denes Hnisz	May 07, 2020
GSE214390	The evolution of the naked mole-rat T cells	Expression profiling by high throughput sequencing	Heterocephalus glaber Mus musculus	66	MTX TSV SRA Run Selector	Nimrod Daniel Rubinstein	Nov 30, 2023
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE102580	A single cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	15	TSV SRA Run Selector	Rapolas Zilionis	Aug 01, 2018
GSE108639	Simultaneous quantifications of protein-DNA contacts and transcriptomics in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	TSV WIG	Koos Rooijers	Apr 21, 2019
GSE111301	mRNA sequencing of the mouse and human Hep-Orgs, Chol-Orgs and primary hepatocytes	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	29	CSV TSV TXT SRA Run Selector	Huili Hu	Nov 29, 2018
GSE113992	Non-coding regions are the main source of tumor-specific antigens	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	15	TSV	Krystel Vincent	Oct 18, 2018
GSE115612	scSLAM-seq reveals core features of transcription dynamics in single cells	Expression profiling by high throughput sequencing	Homo sapiens Murid betaherpesvirus 1 Mus musculus	124	H5 TSV TXT SRA Run Selector	Antoine-Emmanuel Saliba	Jul 10, 2019
GSE120522	Single cell transcriptome profiling of mouse and hESC-derived pancreatic progenitors	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	6	FA GTF MTX TSV TXT SRA Run Selector	Francis C Lynn	Dec 19, 2018