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5814 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057				SRA Run Selector
GSE95430	Single cell RNA-seq of eight thousand epithelium cells from the mammary glands of adult mice	Expression profiling by high throughput sequencing	Mus musculus	2	BAI MTX TSV SRA Run Selector	Gordon K Smyth	Nov 20, 2017
GSE125053	High-resolution analysis of chromatin structure by Mnase-SSP	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BAI BAM SRA Run Selector	Vijay Ramani	Feb 12, 2019
GSE63472	Drop-Seq analysis of P14 mouse retina single-cell suspension	Expression profiling by high throughput sequencing Other	Mus musculus	7	BAM TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE81904	Drop-Seq analysis of P17 FACS sorted retinal cells from the Tg(Chx10-EGFP/cre,-ALPP)2Clc or Vsx2-GFP transgenic line	Expression profiling by high throughput sequencing	Mus musculus	6	BAM R RDATA TXT SRA Run Selector	Karthik Shekhar	Aug 25, 2016
GSE133085	Two distinct functional axes of positive feedback-enforced PRC2 recruitment in mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	69	BAM SRA Run Selector	Gert Jan Veenstra	Aug 06, 2020
GSE148448	Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells	Other	Homo sapiens Mus musculus	27	BAM CSV LOOM TSV TXT SRA Run Selector	Robi D Mitra	Jul 23, 2020
GSE155280	scChIX-seq infers dynamic relationships between histone modifications in single cells	Other	Mus musculus	33	BAM BW CSV RDATA TXT SRA Run Selector	Jake Yeung	Nov 30, 2021
GSE164779	Hierarchical chromatin regulation during blood formation uncovered by single-cell sortChIC	Other	Homo sapiens Mus musculus	106	BAM CSV TXT SRA Run Selector	Jake Yeung	Nov 30, 2021
GSE146292	Stepwise chromatin and transcriptional acquisition of an intraepithelial lymphocyte program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BB BED BIGWIG H5 MTX NARROWPEAK TSV SRA Run Selector	Tiago Castro	Jan 04, 2021
GSE56526	BRD4 dynamics reveal novel acrosome-dependent chromatin reorganization during post-meiotic mammalian sperm development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BW SRA Run Selector	Gregory Donahue	Mar 06, 2015
GSE60738	Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT WIG SRA Run Selector	Hendrik Marks	Jun 15, 2015
GSE61673	Nkx2.2, Nkx6.1, Olig2, and Gli3 genomic binding regions in neural progenitors [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED TXT SRA Run Selector	Yuichi Nishi	Aug 24, 2015
GSE63968	A survey of imprinted gene expression in mouse trophoblast stem cells	Expression profiling by high throughput sequencing	Mus musculus	4	BED TXT SRA Run Selector	J Mauro Calabrese	Feb 24, 2015
GSE65167	ChIP-seq analysis of Arid1a and C/ebpα in the mouse livers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED BIGWIG BROADPEAK SRA Run Selector	Xuxu Sun	Mar 30, 2016
GSE65360	Single-cell chromatin accessibility data using scATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	1632	BED SRA Run Selector	Jason Daniel Buenrostro	Jun 17, 2015
GSE66364	PML protein organizes heterochromatin domains where it regulates histone H3.3 deposition by ATRX/DAXX	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	BED BW CSV SRA Run Selector	Philippe Collas	Mar 06, 2017
GSE67955	The landscape of global-long range interactions in mouse and human blood cell lines mediated by Yy1, GATA1, and CTCF during differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	18	BED TXT SRA Run Selector	Marissa Macchietto	Apr 30, 2019
GSE68582	Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State During Somatic Cell Reprogramming	Other Expression profiling by high throughput sequencing	Mus musculus	20	BED TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 05, 2016
GSE69227	Combined heterozygous loss of Ebf1 and Pax5 allows for T-lineage conversion of B-cell progenitors	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	BED SRA Run Selector	Rajesh Somasundaram	May 27, 2015
GSE69483	Control of stomach smooth muscle development and intestinal rotation by transcription factor BARX1 (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED BW SRA Run Selector	Chenura Jayewickreme	Jun 03, 2015