51 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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Obesity, rather than diet, drives epigenomic alterations in colonic epithelium resembling cancer progression
18 ruifang li Jan 16, 2014
PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage.
32 Hun-Way Hwang Feb 19, 2016
m6A-CLIP identified major presence of m6A in last exons
8 Shengdong Ke Sep 28, 2015
Qki5 CLIP in E14.5 mouse brain
1 Masato Yano Dec 08, 2017
RNAseq in control and shQk KD mouse neural stem cells, and Qki5 CLIP in E14.5 mouse brain
7 Masato Yano Dec 08, 2017
Internally Calibrated ChIP-seq (ICeChIP-seq) using a large panel of antibodies against H3K4 methylations to measure genome-wide histone modification density in mammalian cells
25 Rohan Nishant Shah Sep 20, 2018
Megadomains and superloops form dynamically during X-chromosome inactivation but are dispensable for silencing and escape
65 John Edward Froberg Oct 31, 2018
Characterisation by Next generation Capture-C of Pax6 locus in three mouse cell lines (MV+, RAG and β-TC3 cells).
20 nick gilbert Oct 18, 2018
A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary
56 Nicolas Servant Dec 01, 2019
The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination
133 Frederick W Alt Aug 19, 2019
Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus
170 Meinrad Busslinger Jul 01, 2020
eiCLIP analysis of RBFOX2 in primary mouse hepatocytes
3 LMS Bioinformatics Core Sep 26, 2022
Identification of LARP1 targets in naive CD4 T cells [eCLIP]
12 Alison Galloway May 13, 2021
RNMT regulates the CD4 T cell transcriptome and translatome
46 Alison Galloway May 13, 2021
Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development
132 Dominic Owens Dec 16, 2021
Igh and Igk loci use different folding principles for V gene recombination due to distinct chromosomal architectures of pro-B and pre-B cells
36 Meinrad Busslinger Jan 15, 2023
The role of SMC3 in heart development by regulating super-enhancer associated genes
35 bowen zhang Sep 14, 2023
Pausing of RNA polymerase II regulates mammalian developmental potential
12 Karen Adelman Mar 12, 2015
A Sox2 distal enhancer cluster regulates embryonic stem cell differentiation potential
12 Jennifer Mitchell Nov 19, 2014
Upstream Anti-sense Promoters Act as Local Enhancers of Mammalian Protein-coding Genes
17 Karen Adelman Jun 23, 2015