GEO Browser - GEO

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56 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417				BEDGRAPH
GSE103247	Qki5 CLIP in E14.5 mouse brain	Expression profiling by high throughput sequencing	Mus musculus	1	BED BEDGRAPH SRA Run Selector	Masato Yano	Dec 08, 2017
GSE151747	eiCLIP analysis of RBFOX2 in primary mouse hepatocytes	Expression profiling by high throughput sequencing	Mus musculus	3	BED BEDGRAPH SRA Run Selector	LMS Bioinformatics Core	Sep 26, 2022
GSE212547	NOVA1 HITS-CLIP in wild-type mouse diencephalon/ mesencephalon (P21)	Expression profiling by high throughput sequencing	Mus musculus	3	BEDGRAPH	Yoko Tajima	Aug 15, 2024
GSE139677	Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [ChIP-seq II]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH SRA Run Selector	Shinichiro Chuma	Feb 06, 2020
GSE86964	Target enrichment followed by high throughput sequencing of telomeric DDRNAs in telomere-deprotected mouse cells	Non-coding RNA profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH FA SRA Run Selector	Fabrizio d'Adda di Fagagna	May 10, 2017
GSE128579	Cas9/sgRNA selective targeting of the P23H Rhodopsin mutant allele for treating retinitis pigmentosa by intravitreal AAV9.PHP.B-based delivery	Other	Mus musculus	6	BEDGRAPH SRA Run Selector	Luca Massimino	Mar 20, 2019
GSE134749	Genome-wide CUT&RUN sequencing of H3K27me3 mark across different stages of T-cell development.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH SRA Run Selector	Nicholas Pease	Jul 24, 2019
GSE103248	RNAseq in control and shQk KD mouse neural stem cells, and Qki5 CLIP in E14.5 mouse brain	Expression profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH TXT	Masato Yano	Dec 08, 2017
GSE71154	m6A-CLIP identified major presence of m6A in last exons	Other	Homo sapiens Mus musculus	8	BED BEDGRAPH TXT SRA Run Selector	Shengdong Ke	Sep 28, 2015
GSE94030	Circularized RNA sequencing of wild-type and Mrpp3 knock out mouse heart mitochondria	Other	Mus musculus	8	BEDGRAPH SRA Run Selector	Stefan J Siira	Mar 23, 2017
GSE43390	Pausing of RNA polymerase II regulates mammalian developmental potential	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 12, 2015
GSE58339	A Sox2 distal enhancer cluster regulates embryonic stem cell differentiation potential	Expression profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH SRA Run Selector	Jennifer Mitchell	Nov 19, 2014
GSE116784	Transcriptomic and epigenetic profiling of genome control in the germline stem cell cycle in mice [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH SRA Run Selector	Shinichiro Chuma	Feb 06, 2020
GSE126715	Modular structure and function of the XIST RNP in X chromosome inactivation	Other	Mus musculus	12	BEDGRAPH TXT SRA Run Selector	Zhipeng Lu	Apr 23, 2020
GSE160325	Identification of LARP1 targets in naive CD4 T cells [eCLIP]	Expression profiling by high throughput sequencing	Mus musculus	12	BED BEDGRAPH SRA Run Selector	Alison Galloway	May 13, 2021
GSE62151	Upstream Anti-sense Promoters Act as Local Enhancers of Mammalian Protein-coding Genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH BW WIG SRA Run Selector	Karen Adelman	Jun 23, 2015
GSE147828	miRNA profiling of mouse motor neuron during development	Non-coding RNA profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH SRA Run Selector	Joye Li	Dec 01, 2022
GSE46748	Obesity, rather than diet, drives epigenomic alterations in colonic epithelium resembling cancer progression	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BED BEDGRAPH SRA Run Selector	ruifang li	Jan 16, 2014
GSE190979	YTHDC2 CLIP	Other	Mus musculus	18	BEDGRAPH	Yuhki Saito	Jan 20, 2022
GSE230082	Id3 is required for the maintenance of tissue-infiltrating alloreactive T cells in GVHD but not anti-leukemia responses [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BEDGRAPH TSV	Ying Wang	Jan 24, 2024