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953 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417
GSE43390	Pausing of RNA polymerase II regulates mammalian developmental potential	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 12, 2015
GSE62151	Upstream Anti-sense Promoters Act as Local Enhancers of Mammalian Protein-coding Genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH BW WIG SRA Run Selector	Karen Adelman	Jun 23, 2015
GSE254620	Chromatin conformation capture (4C-seq) from mouse liver	Other	Mus musculus	48	BEDGRAPH	LORENA AGUILAR ARNAL	Aug 01, 2024
GSE68574	A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways [mESCs]	Methylation profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Tarmo Äijö	Jan 01, 2016
GSE68575	A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways [T-cells]	Methylation profiling by high throughput sequencing	Mus musculus	18	TXT SRA Run Selector	Tarmo Äijö	Jan 01, 2016
GSE68576	A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways	Methylation profiling by high throughput sequencing	Mus musculus	30	TXT	Tarmo Äijö	Jan 01, 2016
GSE125831	MAPCap enables high-resolution detection and differential expression analysis of transcription start sites	Expression profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	34	BW TSV SRA Run Selector	Asifa Akhtar	Jun 04, 2019
GSE284723	RNA sequencing of TA skeletal muscle of mice with conditional ablation of dystrophin within the myofiber	Expression profiling by high throughput sequencing	Mus musculus	9	XLSX	Matthew S Alexander	Dec 25, 2024
GSE193246	The ability of resveratrol to attenuate ovalbumin-mediated allergic asthma is associated with changes in microbiota involving the gut-lung axis	Other	Mus musculus	22	XLSX	Esraah Sattar Mahmood Alharris	Mar 15, 2022
GSE53755	Long-range joining of intra-chromosomal DNA double-strand breaks	Genome variation profiling by high throughput sequencing	Mus musculus	13	TXT SRA Run Selector	Frederick Alt	Jan 03, 2014
GSE130214	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination [3C-HTGTS]	Genome variation profiling by high throughput sequencing Other	Mus musculus	19	BEDGRAPH SRA Run Selector	Frederick W Alt	Aug 19, 2019
GSE130216	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination [HTGTS V(D)J-seq]	Genome variation profiling by high throughput sequencing Other	Mus musculus	76	TXT SRA Run Selector	Frederick W Alt	Aug 19, 2019
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE130263	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching [3C-HTGTS]	Genome variation profiling by high throughput sequencing	Mus musculus	75	BEDGRAPH SRA Run Selector	Frederick W Alt	Sep 25, 2019
GSE130265	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching [CSR-HTGTS-Seq]	Genome variation profiling by high throughput sequencing	Mus musculus	21	TXT SRA Run Selector	Frederick W Alt	Sep 25, 2019
GSE130270	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	149	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	Sep 25, 2019
GSE140795	Peyer’s Patch Germinal Centers Select Innate-like BCRs	Expression profiling by high throughput sequencing Other	Mus musculus	225	VLOUPE XLS SRA Run Selector	Frederick W Alt	Feb 21, 2020
GSE142289	Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture [HTGTS-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	104	TXT SRA Run Selector	Frederick W Alt	Jan 13, 2020
GSE142315	Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	116	BW	Frederick W Alt	Jan 11, 2020
GSE142777	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning [LAM-HTGTS]	Other	Mus musculus	110	TXT SRA Run Selector	Frederick W Alt	May 11, 2020