Papio anubis (ID 394) - Genome

Papio anubis (olive baboon)
Representative genome: Papio anubis (assembly Panubis1.0)
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ID: 394

Organism Overview ; Genome Assembly and Annotation report [3] ; Organelle Annotation Report [1]

Papio anubis (olive baboon)

olive baboon; a monkey native to sub-Saharan Africa

Lineage: Eukaryota[15557]; Metazoa[7782]; Chordata[3579]; Craniata[3544]; Vertebrata[3544]; Euteleostomi[3500]; Mammalia[873]; Eutheria[699]; Euarchontoglires[338]; Primates[190]; Haplorrhini[138]; Catarrhini[64]; Cercopithecidae[45]; Cercopithecinae[30]; Papio[3]; Papio anubis[1]

The olive baboon Papio anubis is used in physiological and behavioral studies. Its genome sequence will be useful for comparative genomic studies of primates to determine human-specific mutations.

Summary

Sequence data:

genome assemblies: 3

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 2914.6

median protein count: 71987

median GC%: 40.9646

NCBI Annotation Release:

104

Publications (limited to 20 most recent records)

Eighty million years of rapid evolution of the primate Y chromosome. Zhou Y, et al. Nat Ecol Evol 2023 Jul
High-Resolution Estimates of Crossover and Noncrossover Recombination from a Captive Baboon Colony. Wall JD, et al. Genome Biol Evol 2022 Apr 10
Baboon phylogeny as inferred from complete mitochondrial genomes. Zinner D, et al. Am J Phys Anthropol 2013 Jan

Representative (genome information for reference and representative genomes)

Reference genome:

Papio anubis Panubis1.0

Submitter: University of California, San Francisco

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Chr	1	NC_044976.1	CM018180.1	218.17	41.8	7,243	2	46	1,927	3,714	626

Chr	2	NC_044977.1	CM018181.1	193.66	39.7	4,439	-	4	1,342	2,231	397

Chr	3	NC_044978.1	CM018182.1	184.92	38.2	2,889	-	2	1,066	1,682	330

Chr	4	NC_044979.1	CM018183.1	182.12	40.7	3,934	-	18	1,239	2,279	386

Chr	5	NC_044980.1	CM018184.1	173.9	39.5	2,915	-	18	1,192	1,871	374

Chr	6	NC_044981.1	CM018185.1	167.14	39.6	3,561	-	138	1,204	2,229	420

Chr	7	NC_044982.1	CM018186.1	161.77	41.5	4,461	-	28	1,609	2,555	421

Chr	8	NC_044983.1	CM018187.1	140.28	40.1	2,601	-	6	921	1,466	242

Chr	9	NC_044984.1	CM018188.1	127.59	40.9	3,836	-	10	973	1,881	308

Chr	10	NC_044985.1	CM018189.1	126.46	39.7	2,741	-	3	917	1,360	253

Chr	11	NC_044986.1	CM018190.1	125.91	41.6	3,188	-	4	903	1,482	255

Chr	12	NC_044987.1	CM018191.1	123.34	41.7	4,520	-	13	1,017	2,108	280

Chr	13	NC_044988.1	CM018192.1	106.85	41.4	2,772	-	4	801	1,428	237

Chr	14	NC_044989.1	CM018193.1	106.66	41.1	2,381	1	5	865	1,347	197

Chr	15	NC_044990.1	CM018194.1	91.99	38.6	1,262	-	4	620	813	146

Chr	16	NC_044991.1	CM018195.1	91.18	45.6	3,395	-	-	850	1,675	204

Chr	17	NC_044992.1	CM018196.1	74.53	45.6	3,723	-	32	780	1,724	194

Chr	18	NC_044993.1	CM018197.1	72.89	44.7	2,523	1	25	681	1,297	136

Chr	19	NC_044994.1	CM018198.1	72.12	39.9	1,203	1	-	485	686	115

Chr	20	NC_044995.1	-	50.02	48.6	3,826	-	6	534	1,679	152

Chr	X	NC_044996.1	CM018200.1	142.71	39.3	2,248	1	1	515	1,466	423

Chr	Y	NC_044997.1	CM018201.1	8.31	39.9	111	-	-	53	67	17

	MT	NC_020006.2	-	0.02	43.7	13	2	22	-	13	-

Un	-	.	-	127.28	41.4	2,202	8	20	903	2,225	567

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Summary

Publications (limited to 20 most recent records)

Representative (genome information for reference and representative genomes)

Chromosomes

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