Genome

Limosilactobacillus fermentum A probiotic bacterium Lineage: Bacteria[37505]; Bacillota[6130]; Bacilli[2619]; Lactobacillales[872]; Lactobacillaceae[454]; Limosilactobacillus[46]; Limosilactobacillus fermentum[1]

Lactobacillus. This is the largest genus of the lactic acid bacteria group, with over 50 species in total. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all More...stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.Lactobacillus fermentum.This probiotic species has been associated with active caries lesions. Less...

Summary Sequence data:  genome assemblies: 235; sequence reads: 3  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 1.99965  median protein count: 1892  median GC%: 51.8 Publications (limited to 20 most recent records) Draft genome sequence of Limosilactobacillus fermentum isolated from subgingival biofilm. Jang E-Y, et al. Microbiol Resour Announc 2024 Mar 12 Cataloging the phylogenetic diversity of human bladder bacterial isolates. Du J, et al. Genome Biol 2024 Mar 21 Complete Genome Sequences of 37 Bacteria from the Human Vaginal Tract. Whidbey C, et al. Microbiol Resour Announc 2023 Jun 20 Draft Genome Sequences of Nine Bacillus Strains and Two Weizmannia Strains Isolated from Live Dietary Supplements and a Cultured Food Product. Barnaba TJ, et al. Microbiol Resour Announc 2022 Jan 20 Draft Genome Sequences of 18 Streptococcus Strains Isolated from Live Dietary Supplements and Cultured Food Products. Barnaba TJ, et al. Microbiol Resour Announc 2022 Jun 16 Optimizing Conditions in the Acid Tolerance Test for Potential Probiotics Using Response Surface Methodology. Ko HI, et al. Microbiol Spectr 2022 Aug 31 Pangenome analyses of LuxS-coding genes and enzymatic repertoires in cocoa-related lactic acid bacteria. de Almeida OGG, et al. Genomics 2021 Jul Genome Investigation of Urinary Gardnerella Strains and Their Relationship to Isolates of the Vaginal Microbiota. Putonti C, et al. mSphere 2021 May 12 MGnify: the microbiome analysis resource in 2020. Mitchell AL, et al. Nucleic Acids Res 2020 Jan 8 Aerococcus urinae Isolated from Women with Lower Urinary Tract Symptoms: In Vitro Aggregation and Genome Analysis. Hilt EE, et al. J Bacteriol 2020 Jun 9 Genome-Assisted Characterization of Lactobacillus fermentum, Weissella cibaria, and Weissella confusa Strains Isolated from Sorghum as Starters for Sourdough Fermentation. Falasconi I, et al. Microorganisms 2020 Sep 10 Whole-Genome Shotgun Sequencing and Characterization of Probiotic Strain Clostridium butyricum UBCB 70 To Assess Its Safety. Sulthana A, et al. Microbiol Resour Announc 2019 Jan Single-molecule sequencing detection of N6-methyladenine in microbial reference materials. McIntyre ABR, et al. Nat Commun 2019 Feb 4 Composition and Origin of the Fermentation Microbiota of Mahewu, a Zimbabwean Fermented Cereal Beverage. Pswarayi F, et al. Appl Environ Microbiol 2019 Jun 1 Necrotizing enterocolitis is preceded by increased gut bacterial replication, Klebsiella, and fimbriae-encoding bacteria. Olm MR, et al. Sci Adv 2019 Dec EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Mitchell AL, et al. Nucleic Acids Res 2018 Jan 4 Draft Genome Sequence of Lactobacillus fermentum NCDC 400, Isolated from a Traditional Indian Dairy Product. Azmal Ali S, et al. Genome Announc 2018 Jan 11 Synthesis of multi-omic data and community metabolic models reveals insights into the role of hydrogen sulfide in colon cancer. Hale VL, et al. Methods 2018 Oct 1 Draft Genome Sequences of Bifidobacterium Strains Isolated from Dietary Supplements and Cultured Food Products. Barnaba TJ, et al. Genome Announc 2018 Jun 28 Fifty-Six Draft Genome Sequences of 10 Lactobacillus Species from 22 Commercial Dietary Supplements. Gangiredla J, et al. Genome Announc 2018 Jun 28 More...  Representative (genome information for reference and representative genomes) Reference genome:   Limosilactobacillus fermentum ASM2996122v1 Submitter: Chungbuk National University Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Chr - - CP124737.1 2.07 51.8 1,953 15 58 3 2,107 Plsm pLBF347 - CP124738.1 0.03 40.8 38 - - - 41 Dendrogram (based on genomic BLAST)